Protein–RNA interactions for Protein: Q9H0N0

RAB6C, Ras-related protein Rab-6C, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ9H0N0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 PLK5-205ENST00000642079 1969 ntBASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB6CQ9H0N0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 IKBKGP1-201ENST00000612193 1073 ntBASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB6CQ9H0N0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 AC022517.1-201ENST00000592429 346 ntBASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.71■■□□□ 1.07
RAB6CQ9H0N0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RAB6CQ9H0N0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 AC092437.1-201ENST00000624794 1048 ntBASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 KRT16P2-201ENST00000414673 1423 ntBASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB6CQ9H0N0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 AC137761.2-201ENST00000561729 223 ntBASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 AC145350.3-201ENST00000569033 163 ntBASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 AC011767.1-201ENST00000617410 1153 ntBASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RAB6CQ9H0N0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 KRT18P20-201ENST00000548986 1279 ntBASIC21.68■■□□□ 1.06
RAB6CQ9H0N0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms