Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2AJQ99878 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.41■□□□□ 0.86
HIST1H2AJQ99878 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2AJQ99878 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2AJQ99878 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HIST1H2AJQ99878 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4L2-201ENST00000561772 1275 ntBASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4L6-201ENST00000626483 1275 ntBASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4L1-201ENST00000627662 1275 ntBASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4L8-201ENST00000629013 1275 ntBASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4L3-201ENST00000630187 1275 ntBASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4L7-201ENST00000630678 1275 ntBASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 DUX4L5-201ENST00000630834 1275 ntBASIC20.4■□□□□ 0.86
HIST1H2AJQ99878 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H2AJQ99878 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H2AJQ99878 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
HIST1H2AJQ99878 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2AJQ99878 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 AC010141.2-201ENST00000452426 721 ntBASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HIST1H2AJQ99878 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2AJQ99878 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 AC019069.1-201ENST00000610008 1333 ntBASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 AC097381.1-201ENST00000429019 1296 ntBASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 AP001160.3-201ENST00000601484 763 ntBASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.36■□□□□ 0.85
HIST1H2AJQ99878 KRT16P2-201ENST00000414673 1423 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms