Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDF1Q96CC6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.29■□□□□ 0.84
RHBDF1Q96CC6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDF1Q96CC6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDF1Q96CC6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDF1Q96CC6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDF1Q96CC6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHBDF1Q96CC6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RHBDF1Q96CC6 AC121338.2-201ENST00000622535 1744 ntBASIC20.27■□□□□ 0.83
RHBDF1Q96CC6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RHBDF1Q96CC6 AC073130.3-201ENST00000624389 2278 ntBASIC20.27■□□□□ 0.83
RHBDF1Q96CC6 AC006128.1-201ENST00000624704 1661 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4L2-201ENST00000561772 1275 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4L6-201ENST00000626483 1275 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4L1-201ENST00000627662 1275 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4L8-201ENST00000629013 1275 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4L3-201ENST00000630187 1275 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4L7-201ENST00000630678 1275 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DUX4L5-201ENST00000630834 1275 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 KRT16P2-201ENST00000414673 1423 ntBASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDF1Q96CC6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 AP001160.3-201ENST00000601484 763 ntBASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 AC004854.2-201ENST00000608450 1441 ntBASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDF1Q96CC6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RHBDF1Q96CC6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDF1Q96CC6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
RHBDF1Q96CC6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms