Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM54Q969K7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.39■□□□□ 0.53
TMEM54Q969K7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM54Q969K7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM54Q969K7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
TMEM54Q969K7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM54Q969K7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM54Q969K7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.38■□□□□ 0.53
TMEM54Q969K7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM54Q969K7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM54Q969K7 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.38■□□□□ 0.53
TMEM54Q969K7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM54Q969K7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM54Q969K7 AC121338.2-201ENST00000622535 1744 ntBASIC18.37■□□□□ 0.53
TMEM54Q969K7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 AL162430.1-201ENST00000480705 870 ntBASIC18.37■□□□□ 0.53
TMEM54Q969K7 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 MYCNOS-205ENST00000641950 531 ntBASIC18.37■□□□□ 0.53
TMEM54Q969K7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM54Q969K7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM54Q969K7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.36■□□□□ 0.53
TMEM54Q969K7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM54Q969K7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 AC243732.1-201ENST00000612648 864 ntBASIC18.36■□□□□ 0.53
TMEM54Q969K7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.36■□□□□ 0.53
TMEM54Q969K7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 RBM17P2-201ENST00000616397 1405 ntBASIC18.35■□□□□ 0.53
TMEM54Q969K7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 AC137761.2-201ENST00000561729 223 ntBASIC18.35■□□□□ 0.53
TMEM54Q969K7 AC145350.3-201ENST00000569033 163 ntBASIC18.35■□□□□ 0.53
TMEM54Q969K7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM54Q969K7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM54Q969K7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 PLK5-205ENST00000642079 1969 ntBASIC18.34■□□□□ 0.53
TMEM54Q969K7 MIR935-201ENST00000401179 91 ntBASIC18.34■□□□□ 0.53
TMEM54Q969K7 KRT18P11-201ENST00000435214 1283 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms