Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 KRT18P57-201ENST00000443599 1254 ntBASIC18.39■□□□□ 0.53
USP9XQ93008 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.39■□□□□ 0.53
USP9XQ93008 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USP9XQ93008 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USP9XQ93008 AL023875.1-201ENST00000640777 796 ntBASIC18.39■□□□□ 0.53
USP9XQ93008 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP9XQ93008 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.39■□□□□ 0.53
USP9XQ93008 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP9XQ93008 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.38■□□□□ 0.53
USP9XQ93008 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.38■□□□□ 0.53
USP9XQ93008 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USP9XQ93008 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP9XQ93008 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP9XQ93008 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.38■□□□□ 0.53
USP9XQ93008 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP9XQ93008 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP9XQ93008 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP9XQ93008 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP9XQ93008 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.38■□□□□ 0.53
USP9XQ93008 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.38■□□□□ 0.53
USP9XQ93008 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP9XQ93008 AC061975.6-201ENST00000579045 1553 ntBASIC18.38■□□□□ 0.53
USP9XQ93008 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 MIR6786-201ENST00000616843 113 ntBASIC18.37■□□□□ 0.53
USP9XQ93008 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.37■□□□□ 0.53
USP9XQ93008 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.37■□□□□ 0.53
USP9XQ93008 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USP9XQ93008 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.37■□□□□ 0.53
USP9XQ93008 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
USP9XQ93008 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.37■□□□□ 0.53
USP9XQ93008 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.37■□□□□ 0.53
USP9XQ93008 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 AC113410.3-201ENST00000623366 203 ntBASIC18.37■□□□□ 0.53
USP9XQ93008 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP9XQ93008 MCRIP2P1-201ENST00000394346 511 ntBASIC18.37■□□□□ 0.53
USP9XQ93008 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.37■□□□□ 0.53
USP9XQ93008 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
USP9XQ93008 AL121894.2-201ENST00000602977 491 ntBASIC18.37■□□□□ 0.53
USP9XQ93008 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.37■□□□□ 0.53
USP9XQ93008 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
USP9XQ93008 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP9XQ93008 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.36■□□□□ 0.53
USP9XQ93008 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP9XQ93008 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP9XQ93008 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.36■□□□□ 0.53
USP9XQ93008 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.36■□□□□ 0.53
USP9XQ93008 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.36■□□□□ 0.53
USP9XQ93008 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.36■□□□□ 0.53
USP9XQ93008 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
USP9XQ93008 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.36■□□□□ 0.53
USP9XQ93008 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP9XQ93008 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
USP9XQ93008 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP9XQ93008 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP9XQ93008 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP9XQ93008 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP9XQ93008 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP9XQ93008 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.35■□□□□ 0.53
USP9XQ93008 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP9XQ93008 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP9XQ93008 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP9XQ93008 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP9XQ93008 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USP9XQ93008 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.35■□□□□ 0.53
USP9XQ93008 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.35■□□□□ 0.53
USP9XQ93008 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP9XQ93008 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.34■□□□□ 0.53
USP9XQ93008 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
USP9XQ93008 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms