Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM9SF4Q92544 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TM9SF4Q92544 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM9SF4Q92544 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM9SF4Q92544 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TM9SF4Q92544 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 AC120498.10-201ENST00000621827 505 ntBASIC19.62■□□□□ 0.73
TM9SF4Q92544 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TM9SF4Q92544 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM9SF4Q92544 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.61■□□□□ 0.73
TM9SF4Q92544 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TM9SF4Q92544 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 AC105036.2-201ENST00000569468 176 ntBASIC19.61■□□□□ 0.73
TM9SF4Q92544 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.61■□□□□ 0.73
TM9SF4Q92544 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TM9SF4Q92544 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TM9SF4Q92544 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TM9SF4Q92544 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM9SF4Q92544 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 AC005229.4-201ENST00000610085 2198 ntBASIC19.6■□□□□ 0.73
TM9SF4Q92544 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 AC069152.1-201ENST00000438030 544 ntBASIC19.6■□□□□ 0.73
TM9SF4Q92544 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.6■□□□□ 0.73
TM9SF4Q92544 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM9SF4Q92544 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TM9SF4Q92544 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.59■□□□□ 0.73
TM9SF4Q92544 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.59■□□□□ 0.73
TM9SF4Q92544 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.59■□□□□ 0.73
TM9SF4Q92544 AC073210.2-201ENST00000430369 194 ntBASIC19.59■□□□□ 0.73
TM9SF4Q92544 GUSBP6-202ENST00000438529 1198 ntBASIC19.59■□□□□ 0.73
TM9SF4Q92544 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.59■□□□□ 0.73
TM9SF4Q92544 AC053503.5-201ENST00000601508 636 ntBASIC19.59■□□□□ 0.73
TM9SF4Q92544 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF4Q92544 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF4Q92544 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF4Q92544 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF4Q92544 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF4Q92544 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF4Q92544 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TM9SF4Q92544 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.58■□□□□ 0.72
TM9SF4Q92544 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.58■□□□□ 0.72
TM9SF4Q92544 CNN2P6-201ENST00000439038 900 ntBASIC19.58■□□□□ 0.72
TM9SF4Q92544 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TM9SF4Q92544 AL138781.1-201ENST00000566567 1274 ntBASIC19.58■□□□□ 0.72
TM9SF4Q92544 AC008694.1-202ENST00000636953 945 ntBASIC19.58■□□□□ 0.72
TM9SF4Q92544 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.58■□□□□ 0.72
TM9SF4Q92544 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF4Q92544 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF4Q92544 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF4Q92544 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.57■□□□□ 0.72
TM9SF4Q92544 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF4Q92544 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.57■□□□□ 0.72
TM9SF4Q92544 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF4Q92544 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF4Q92544 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.57■□□□□ 0.72
TM9SF4Q92544 TERF1P5-201ENST00000477545 1207 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms