Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX1Q92499 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.23■■□□□ 1.15
DDX1Q92499 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX1Q92499 KRT18P61-201ENST00000585825 1298 ntBASIC22.23■■□□□ 1.15
DDX1Q92499 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.23■■□□□ 1.15
DDX1Q92499 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 AP004607.4-201ENST00000530158 1459 ntBASIC22.22■■□□□ 1.15
DDX1Q92499 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
DDX1Q92499 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX1Q92499 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
DDX1Q92499 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX1Q92499 AC010141.2-201ENST00000452426 721 ntBASIC22.22■■□□□ 1.15
DDX1Q92499 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX1Q92499 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.22■■□□□ 1.15
DDX1Q92499 AC104187.1-201ENST00000607510 612 ntBASIC22.22■■□□□ 1.15
DDX1Q92499 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX1Q92499 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
DDX1Q92499 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX1Q92499 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX1Q92499 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
DDX1Q92499 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX1Q92499 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
DDX1Q92499 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.21■■□□□ 1.15
DDX1Q92499 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.21■■□□□ 1.15
DDX1Q92499 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.21■■□□□ 1.15
DDX1Q92499 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX1Q92499 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX1Q92499 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.2■■□□□ 1.15
DDX1Q92499 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.2■■□□□ 1.15
DDX1Q92499 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX1Q92499 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX1Q92499 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX1Q92499 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DDX1Q92499 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX1Q92499 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.2■■□□□ 1.14
DDX1Q92499 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX1Q92499 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX1Q92499 POU5F1P4-201ENST00000413175 1085 ntBASIC22.2■■□□□ 1.14
DDX1Q92499 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX1Q92499 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX1Q92499 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
DDX1Q92499 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.2■■□□□ 1.14
DDX1Q92499 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.2■■□□□ 1.14
DDX1Q92499 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.2■■□□□ 1.14
DDX1Q92499 AC004854.2-201ENST00000608450 1441 ntBASIC22.2■■□□□ 1.14
DDX1Q92499 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
DDX1Q92499 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX1Q92499 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX1Q92499 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
DDX1Q92499 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.19■■□□□ 1.14
DDX1Q92499 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DDX1Q92499 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX1Q92499 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.19■■□□□ 1.14
DDX1Q92499 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.19■■□□□ 1.14
DDX1Q92499 AC008175.2-201ENST00000612840 297 ntBASIC22.19■■□□□ 1.14
DDX1Q92499 AC066615.1-201ENST00000640911 628 ntBASIC22.19■■□□□ 1.14
DDX1Q92499 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.19■■□□□ 1.14
DDX1Q92499 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
DDX1Q92499 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
DDX1Q92499 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
DDX1Q92499 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX1Q92499 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
DDX1Q92499 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
DDX1Q92499 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
DDX1Q92499 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.18■■□□□ 1.14
DDX1Q92499 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms