Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.27■■□□□ 1
SCG3Q8WXD2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.27■■□□□ 1
SCG3Q8WXD2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCG3Q8WXD2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCG3Q8WXD2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.27■■□□□ 1
SCG3Q8WXD2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SCG3Q8WXD2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SCG3Q8WXD2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SCG3Q8WXD2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SCG3Q8WXD2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SCG3Q8WXD2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 KRT19P1-201ENST00000405746 1186 ntBASIC21.26■□□□□ 0.99
SCG3Q8WXD2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.26■□□□□ 0.99
SCG3Q8WXD2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 AC005229.4-201ENST00000610085 2198 ntBASIC21.25■□□□□ 0.99
SCG3Q8WXD2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCG3Q8WXD2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.24■□□□□ 0.99
SCG3Q8WXD2 AP006587.3-201ENST00000525742 1516 ntBASIC21.24■□□□□ 0.99
SCG3Q8WXD2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 AC009237.3-201ENST00000393279 1427 ntBASIC21.23■□□□□ 0.99
SCG3Q8WXD2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 AC079140.4-201ENST00000507448 529 ntBASIC21.23■□□□□ 0.99
SCG3Q8WXD2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.23■□□□□ 0.99
SCG3Q8WXD2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 AP004607.4-201ENST00000530158 1459 ntBASIC21.22■□□□□ 0.99
SCG3Q8WXD2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.22■□□□□ 0.99
SCG3Q8WXD2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms