Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.87■■□□□ 1.73
SSH3Q8TE77 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SSH3Q8TE77 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SSH3Q8TE77 AC005229.4-201ENST00000610085 2198 ntBASIC25.86■■□□□ 1.73
SSH3Q8TE77 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SSH3Q8TE77 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SSH3Q8TE77 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SSH3Q8TE77 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SSH3Q8TE77 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 CDCA4P2-201ENST00000441182 718 ntBASIC25.86■■□□□ 1.73
SSH3Q8TE77 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 AC073111.5-205ENST00000641717 521 ntBASIC25.86■■□□□ 1.73
SSH3Q8TE77 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SSH3Q8TE77 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.86■■□□□ 1.73
SSH3Q8TE77 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.85■■□□□ 1.73
SSH3Q8TE77 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SSH3Q8TE77 CLDN5-201ENST00000403084 2357 ntBASIC25.85■■□□□ 1.73
SSH3Q8TE77 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SSH3Q8TE77 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SSH3Q8TE77 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SSH3Q8TE77 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SSH3Q8TE77 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.85■■□□□ 1.73
SSH3Q8TE77 AC007322.4-201ENST00000509611 723 ntBASIC25.85■■□□□ 1.73
SSH3Q8TE77 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.85■■□□□ 1.73
SSH3Q8TE77 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SSH3Q8TE77 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.85■■□□□ 1.73
SSH3Q8TE77 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.84■■□□□ 1.73
SSH3Q8TE77 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.84■■□□□ 1.73
SSH3Q8TE77 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.84■■□□□ 1.73
SSH3Q8TE77 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.84■■□□□ 1.73
SSH3Q8TE77 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
SSH3Q8TE77 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
SSH3Q8TE77 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SSH3Q8TE77 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
SSH3Q8TE77 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
SSH3Q8TE77 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SSH3Q8TE77 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.83■■□□□ 1.73
SSH3Q8TE77 AC013268.1-206ENST00000638368 961 ntBASIC25.83■■□□□ 1.73
SSH3Q8TE77 AC112229.1-201ENST00000639295 961 ntBASIC25.83■■□□□ 1.73
SSH3Q8TE77 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SSH3Q8TE77 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SSH3Q8TE77 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SSH3Q8TE77 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
SSH3Q8TE77 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.82■■□□□ 1.72
SSH3Q8TE77 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.82■■□□□ 1.72
SSH3Q8TE77 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.82■■□□□ 1.72
SSH3Q8TE77 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SSH3Q8TE77 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SSH3Q8TE77 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SSH3Q8TE77 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SSH3Q8TE77 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SSH3Q8TE77 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.81■■□□□ 1.72
SSH3Q8TE77 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SSH3Q8TE77 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.81■■□□□ 1.72
SSH3Q8TE77 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SSH3Q8TE77 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SSH3Q8TE77 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.81■■□□□ 1.72
SSH3Q8TE77 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.8■■□□□ 1.72
SSH3Q8TE77 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SSH3Q8TE77 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.8■■□□□ 1.72
SSH3Q8TE77 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.8■■□□□ 1.72
SSH3Q8TE77 AC231657.2-201ENST00000624556 255 ntBASIC25.8■■□□□ 1.72
SSH3Q8TE77 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.8■■□□□ 1.72
SSH3Q8TE77 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SSH3Q8TE77 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
SSH3Q8TE77 AL137060.1-201ENST00000618151 2648 ntBASIC25.8■■□□□ 1.72
SSH3Q8TE77 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.79■■□□□ 1.72
SSH3Q8TE77 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SSH3Q8TE77 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SSH3Q8TE77 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SSH3Q8TE77 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.79■■□□□ 1.72
SSH3Q8TE77 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.79■■□□□ 1.72
SSH3Q8TE77 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.79■■□□□ 1.72
SSH3Q8TE77 AC068338.2-201ENST00000563278 1430 ntBASIC25.79■■□□□ 1.72
SSH3Q8TE77 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SSH3Q8TE77 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SSH3Q8TE77 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms