Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
FNDC9Q8TBE3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FNDC9Q8TBE3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 MIR663A-201ENST00000385250 93 ntBASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 AC007322.1-201ENST00000426983 750 ntBASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC9Q8TBE3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.75■□□□□ 0.59
FNDC9Q8TBE3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 CNN2P6-201ENST00000439038 900 ntBASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 TERF1P5-201ENST00000477545 1207 ntBASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.74■□□□□ 0.59
FNDC9Q8TBE3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 ID1-201ENST00000376105 1233 ntBASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 AC013268.1-206ENST00000638368 961 ntBASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 AC112229.1-201ENST00000639295 961 ntBASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.73■□□□□ 0.59
FNDC9Q8TBE3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 AC005181.1-201ENST00000604782 1256 ntBASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms