Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 KRT18P20-201ENST00000548986 1279 ntBASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 AL049796.1-201ENST00000565336 1766 ntBASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNRF1Q8ND25 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNRF1Q8ND25 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 KRT16P2-201ENST00000414673 1423 ntBASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 AC137761.2-201ENST00000561729 223 ntBASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 AC145350.3-201ENST00000569033 163 ntBASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 UBE2DNL-204ENST00000602536 740 ntBASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNRF1Q8ND25 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNRF1Q8ND25 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 AC016769.1-201ENST00000409132 1010 ntBASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNRF1Q8ND25 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNRF1Q8ND25 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms