Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIML2Q8N7C3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 AL136116.3-201ENST00000402907 1138 ntBASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIML2Q8N7C3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 BX842568.3-201ENST00000418104 571 ntBASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 AC003102.1-202ENST00000563394 1796 ntBASIC20.02■□□□□ 0.8
TRIML2Q8N7C3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIML2Q8N7C3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
TRIML2Q8N7C3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIML2Q8N7C3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20■□□□□ 0.79
TRIML2Q8N7C3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIML2Q8N7C3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIML2Q8N7C3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIML2Q8N7C3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIML2Q8N7C3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20■□□□□ 0.79
TRIML2Q8N7C3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20■□□□□ 0.79
TRIML2Q8N7C3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIML2Q8N7C3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20■□□□□ 0.79
TRIML2Q8N7C3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIML2Q8N7C3 AP006587.3-201ENST00000525742 1516 ntBASIC20■□□□□ 0.79
TRIML2Q8N7C3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRIML2Q8N7C3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIML2Q8N7C3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20■□□□□ 0.79
TRIML2Q8N7C3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIML2Q8N7C3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms