Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 AC055733.4-201ENST00000638462 1354 ntBASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 AC020907.5-201ENST00000624372 1936 ntBASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01561Q8N1V8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01561Q8N1V8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01561Q8N1V8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01561Q8N1V8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01561Q8N1V8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01561Q8N1V8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
LINC01561Q8N1V8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01561Q8N1V8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 AC073314.1-201ENST00000568729 2216 ntBASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01561Q8N1V8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01561Q8N1V8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms