Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST3Q8N1M1 RBM17P2-201ENST00000616397 1405 ntBASIC19.34■□□□□ 0.69
BEST3Q8N1M1 GUSBP5-202ENST00000510805 1989 ntBASIC19.33■□□□□ 0.69
BEST3Q8N1M1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BEST3Q8N1M1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BEST3Q8N1M1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BEST3Q8N1M1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 AC242852.2-201ENST00000615738 1807 ntBASIC19.32■□□□□ 0.68
BEST3Q8N1M1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 AC008694.1-202ENST00000636953 945 ntBASIC19.32■□□□□ 0.68
BEST3Q8N1M1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST3Q8N1M1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 AC069236.1-201ENST00000604339 616 ntBASIC19.31■□□□□ 0.68
BEST3Q8N1M1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST3Q8N1M1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 AC016405.3-201ENST00000607710 860 ntBASIC19.3■□□□□ 0.68
BEST3Q8N1M1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 OR10C1-204ENST00000622521 1039 ntBASIC19.3■□□□□ 0.68
BEST3Q8N1M1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST3Q8N1M1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 AC093787.1-201ENST00000450396 207 ntBASIC19.29■□□□□ 0.68
BEST3Q8N1M1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 AC243732.1-201ENST00000612648 864 ntBASIC19.29■□□□□ 0.68
BEST3Q8N1M1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.29■□□□□ 0.68
BEST3Q8N1M1 MKRN4P-201ENST00000444706 1521 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms