Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
ABCA6Q8N139 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
ABCA6Q8N139 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.28■■■□□ 2.6
ABCA6Q8N139 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
ABCA6Q8N139 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 SAPCD2P1-201ENST00000395413 1184 ntBASIC31.28■■■□□ 2.6
ABCA6Q8N139 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC31.28■■■□□ 2.6
ABCA6Q8N139 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC31.28■■■□□ 2.6
ABCA6Q8N139 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 CYP21A1P-202ENST00000354927 1481 ntBASIC31.28■■■□□ 2.6
ABCA6Q8N139 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.28■■■□□ 2.6
ABCA6Q8N139 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ABCA6Q8N139 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
ABCA6Q8N139 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.27■■■□□ 2.6
ABCA6Q8N139 AC007322.3-201ENST00000426526 701 ntBASIC31.27■■■□□ 2.6
ABCA6Q8N139 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
ABCA6Q8N139 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA6Q8N139 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA6Q8N139 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.27■■■□□ 2.6
ABCA6Q8N139 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.27■■■□□ 2.6
ABCA6Q8N139 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC31.26■■■□□ 2.6
ABCA6Q8N139 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC31.26■■■□□ 2.6
ABCA6Q8N139 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ABCA6Q8N139 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC31.26■■■□□ 2.59
ABCA6Q8N139 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ABCA6Q8N139 AC133681.1-201ENST00000465482 601 ntBASIC31.26■■■□□ 2.59
ABCA6Q8N139 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.26■■■□□ 2.59
ABCA6Q8N139 MTDHP1-201ENST00000605323 784 ntBASIC31.26■■■□□ 2.59
ABCA6Q8N139 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ABCA6Q8N139 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC31.26■■■□□ 2.59
ABCA6Q8N139 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ABCA6Q8N139 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC31.26■■■□□ 2.59
ABCA6Q8N139 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA6Q8N139 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA6Q8N139 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA6Q8N139 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA6Q8N139 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC31.25■■■□□ 2.59
ABCA6Q8N139 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC31.25■■■□□ 2.59
ABCA6Q8N139 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.25■■■□□ 2.59
ABCA6Q8N139 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA6Q8N139 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA6Q8N139 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
ABCA6Q8N139 TSPY15P-201ENST00000457163 923 ntBASIC31.24■■■□□ 2.59
ABCA6Q8N139 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ABCA6Q8N139 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ABCA6Q8N139 AC113410.3-201ENST00000623366 203 ntBASIC31.24■■■□□ 2.59
ABCA6Q8N139 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ABCA6Q8N139 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
ABCA6Q8N139 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
ABCA6Q8N139 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC31.23■■■□□ 2.59
ABCA6Q8N139 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
ABCA6Q8N139 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA6Q8N139 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA6Q8N139 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA6Q8N139 C11orf96-202ENST00000528572 1834 ntBASIC31.23■■■□□ 2.59
ABCA6Q8N139 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC31.23■■■□□ 2.59
ABCA6Q8N139 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.23■■■□□ 2.59
ABCA6Q8N139 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA6Q8N139 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
ABCA6Q8N139 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.23■■■□□ 2.59
ABCA6Q8N139 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA6Q8N139 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA6Q8N139 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.22■■■□□ 2.59
ABCA6Q8N139 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA6Q8N139 KRT18P68-201ENST00000392293 1000 ntBASIC31.22■■■□□ 2.59
ABCA6Q8N139 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.22■■■□□ 2.59
ABCA6Q8N139 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
ABCA6Q8N139 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA6Q8N139 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCA6Q8N139 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC31.22■■■□□ 2.59
ABCA6Q8N139 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
ABCA6Q8N139 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
ABCA6Q8N139 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
ABCA6Q8N139 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.21■■■□□ 2.59
ABCA6Q8N139 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
ABCA6Q8N139 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA6Q8N139 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA6Q8N139 AC239809.2-201ENST00000415381 517 ntBASIC31.2■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms