Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 MTDHP1-201ENST00000605323 784 ntBASIC30.08■■■□□ 2.41
UBR1Q8IWV7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 CYP21A1P-202ENST00000354927 1481 ntBASIC30.07■■■□□ 2.4
UBR1Q8IWV7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC30.07■■■□□ 2.4
UBR1Q8IWV7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBR1Q8IWV7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 KRT18P68-201ENST00000392293 1000 ntBASIC30.05■■■□□ 2.4
UBR1Q8IWV7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC30.05■■■□□ 2.4
UBR1Q8IWV7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
UBR1Q8IWV7 AC113410.3-201ENST00000623366 203 ntBASIC30.04■■■□□ 2.4
UBR1Q8IWV7 C11orf96-202ENST00000528572 1834 ntBASIC30.04■■■□□ 2.4
UBR1Q8IWV7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 HES2-205ENST00000487437 968 ntTSL 3 BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC30.03■■■□□ 2.4
UBR1Q8IWV7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 AC097493.4-201ENST00000641197 219 ntBASIC30.02■■■□□ 2.4
UBR1Q8IWV7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.02■■■□□ 2.4
UBR1Q8IWV7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC30.01■■■□□ 2.4
UBR1Q8IWV7 NFE2L3P1-201ENST00000588207 1959 ntBASIC30.01■■■□□ 2.4
UBR1Q8IWV7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
UBR1Q8IWV7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
UBR1Q8IWV7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
UBR1Q8IWV7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
UBR1Q8IWV7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
UBR1Q8IWV7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
UBR1Q8IWV7 AC239809.2-201ENST00000415381 517 ntBASIC30.01■■■□□ 2.39
UBR1Q8IWV7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC30.01■■■□□ 2.39
UBR1Q8IWV7 AC133561.5-201ENST00000635547 218 ntBASIC30.01■■■□□ 2.39
UBR1Q8IWV7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
UBR1Q8IWV7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC30■■■□□ 2.39
UBR1Q8IWV7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms