Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NPAS4Q8IUM7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 FAM99A-202ENST00000538190 1989 ntBASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 UBE2SP1-201ENST00000450587 669 ntBASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 AL359736.2-201ENST00000621992 437 ntBASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NPAS4Q8IUM7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 AC008550.1-201ENST00000511500 884 ntBASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 AC092368.3-202ENST00000574180 1591 ntBASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NPAS4Q8IUM7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
NPAS4Q8IUM7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.19
NPAS4Q8IUM7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
NPAS4Q8IUM7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.44■■□□□ 1.18
NPAS4Q8IUM7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 CYP21A1P-202ENST00000354927 1481 ntBASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.43■■□□□ 1.18
NPAS4Q8IUM7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NPAS4Q8IUM7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms