Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CSMD2Q7Z408 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CSMD2Q7Z408 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CSMD2Q7Z408 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSMD2Q7Z408 AC003102.1-202ENST00000563394 1796 ntBASIC17.77■□□□□ 0.44
CSMD2Q7Z408 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSMD2Q7Z408 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.77■□□□□ 0.44
CSMD2Q7Z408 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CSMD2Q7Z408 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CSMD2Q7Z408 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CSMD2Q7Z408 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CSMD2Q7Z408 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 AC113347.1-201ENST00000413321 391 ntBASIC17.75■□□□□ 0.43
CSMD2Q7Z408 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 AC137767.1-201ENST00000602918 1920 ntBASIC17.75■□□□□ 0.43
CSMD2Q7Z408 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD2Q7Z408 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 AC100791.3-201ENST00000617619 330 ntBASIC17.74■□□□□ 0.43
CSMD2Q7Z408 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 AL589743.5-201ENST00000616611 1050 ntBASIC17.74■□□□□ 0.43
CSMD2Q7Z408 AL590326.2-201ENST00000625139 305 ntBASIC17.74■□□□□ 0.43
CSMD2Q7Z408 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CSMD2Q7Z408 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 AL121894.2-201ENST00000602977 491 ntBASIC17.73■□□□□ 0.43
CSMD2Q7Z408 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CSMD2Q7Z408 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 AC239809.2-201ENST00000415381 517 ntBASIC17.72■□□□□ 0.43
CSMD2Q7Z408 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 AL135905.2-201ENST00000584934 1404 ntBASIC17.72■□□□□ 0.43
CSMD2Q7Z408 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.72■□□□□ 0.43
CSMD2Q7Z408 KRT18P57-201ENST00000443599 1254 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms