Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHFQ7M4L6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHFQ7M4L6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHFQ7M4L6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHFQ7M4L6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHFQ7M4L6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.78■□□□□ 0.6
SHFQ7M4L6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHFQ7M4L6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHFQ7M4L6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHFQ7M4L6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHFQ7M4L6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHFQ7M4L6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHFQ7M4L6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHFQ7M4L6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.77■□□□□ 0.6
SHFQ7M4L6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHFQ7M4L6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.77■□□□□ 0.59
SHFQ7M4L6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHFQ7M4L6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHFQ7M4L6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.77■□□□□ 0.59
SHFQ7M4L6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 AL136116.3-201ENST00000402907 1138 ntBASIC18.76■□□□□ 0.59
SHFQ7M4L6 BX842568.3-201ENST00000418104 571 ntBASIC18.76■□□□□ 0.59
SHFQ7M4L6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHFQ7M4L6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 AC007952.6-201ENST00000573168 2673 ntBASIC18.76■□□□□ 0.59
SHFQ7M4L6 AC003957.1-201ENST00000625108 2673 ntBASIC18.76■□□□□ 0.59
SHFQ7M4L6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SHFQ7M4L6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHFQ7M4L6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHFQ7M4L6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHFQ7M4L6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHFQ7M4L6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHFQ7M4L6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHFQ7M4L6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHFQ7M4L6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.75■□□□□ 0.59
SHFQ7M4L6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms