Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf139Q6ZV77 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C9orf139Q6ZV77 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
C9orf139Q6ZV77 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
C9orf139Q6ZV77 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 DUSP5P2-201ENST00000426873 1033 ntBASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf139Q6ZV77 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 AC066615.1-201ENST00000640911 628 ntBASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf139Q6ZV77 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 GUSBP5-202ENST00000510805 1989 ntBASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 LSM12P1-201ENST00000411836 588 ntBASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms