Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KRT40Q6A162 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.13■■□□□ 1.45
KRT40Q6A162 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
KRT40Q6A162 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
KRT40Q6A162 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
KRT40Q6A162 CDCA4P2-201ENST00000441182 718 ntBASIC24.13■■□□□ 1.45
KRT40Q6A162 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.13■■□□□ 1.45
KRT40Q6A162 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.13■■□□□ 1.45
KRT40Q6A162 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
KRT40Q6A162 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.13■■□□□ 1.45
KRT40Q6A162 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
KRT40Q6A162 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.13■■□□□ 1.45
KRT40Q6A162 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
KRT40Q6A162 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KRT40Q6A162 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
KRT40Q6A162 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KRT40Q6A162 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.12■■□□□ 1.45
KRT40Q6A162 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.12■■□□□ 1.45
KRT40Q6A162 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KRT40Q6A162 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
KRT40Q6A162 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.12■■□□□ 1.45
KRT40Q6A162 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.12■■□□□ 1.45
KRT40Q6A162 KRT18P61-201ENST00000585825 1298 ntBASIC24.12■■□□□ 1.45
KRT40Q6A162 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KRT40Q6A162 AC104187.1-201ENST00000607510 612 ntBASIC24.12■■□□□ 1.45
KRT40Q6A162 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.12■■□□□ 1.45
KRT40Q6A162 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.12■■□□□ 1.45
KRT40Q6A162 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KRT40Q6A162 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
KRT40Q6A162 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KRT40Q6A162 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.12■■□□□ 1.45
KRT40Q6A162 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.11■■□□□ 1.45
KRT40Q6A162 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.11■■□□□ 1.45
KRT40Q6A162 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.11■■□□□ 1.45
KRT40Q6A162 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.11■■□□□ 1.45
KRT40Q6A162 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.11■■□□□ 1.45
KRT40Q6A162 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.11■■□□□ 1.45
KRT40Q6A162 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.11■■□□□ 1.45
KRT40Q6A162 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KRT40Q6A162 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.11■■□□□ 1.45
KRT40Q6A162 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.1■■□□□ 1.45
KRT40Q6A162 AC004854.2-201ENST00000608450 1441 ntBASIC24.1■■□□□ 1.45
KRT40Q6A162 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.1■■□□□ 1.45
KRT40Q6A162 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.1■■□□□ 1.45
KRT40Q6A162 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.1■■□□□ 1.45
KRT40Q6A162 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.1■■□□□ 1.45
KRT40Q6A162 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.1■■□□□ 1.45
KRT40Q6A162 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.1■■□□□ 1.45
KRT40Q6A162 AC104771.1-201ENST00000603335 964 ntBASIC24.1■■□□□ 1.45
KRT40Q6A162 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.1■■□□□ 1.45
KRT40Q6A162 AC073111.5-205ENST00000641717 521 ntBASIC24.1■■□□□ 1.45
KRT40Q6A162 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 AP004607.4-201ENST00000530158 1459 ntBASIC24.1■■□□□ 1.45
KRT40Q6A162 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KRT40Q6A162 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.1■■□□□ 1.45
KRT40Q6A162 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.1■■□□□ 1.45
KRT40Q6A162 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.09■■□□□ 1.45
KRT40Q6A162 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.09■■□□□ 1.45
KRT40Q6A162 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.09■■□□□ 1.45
KRT40Q6A162 AC010141.2-201ENST00000452426 721 ntBASIC24.09■■□□□ 1.45
KRT40Q6A162 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.09■■□□□ 1.45
KRT40Q6A162 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.09■■□□□ 1.45
KRT40Q6A162 AC008175.2-201ENST00000612840 297 ntBASIC24.09■■□□□ 1.45
KRT40Q6A162 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.09■■□□□ 1.45
KRT40Q6A162 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KRT40Q6A162 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.09■■□□□ 1.45
KRT40Q6A162 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
KRT40Q6A162 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
KRT40Q6A162 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.08■■□□□ 1.45
KRT40Q6A162 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
KRT40Q6A162 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.08■■□□□ 1.45
KRT40Q6A162 POU5F1P4-201ENST00000413175 1085 ntBASIC24.08■■□□□ 1.45
KRT40Q6A162 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
KRT40Q6A162 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.08■■□□□ 1.45
KRT40Q6A162 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.08■■□□□ 1.45
KRT40Q6A162 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
KRT40Q6A162 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms