Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF43Q68DV7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF43Q68DV7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RNF43Q68DV7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF43Q68DV7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF43Q68DV7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF43Q68DV7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF43Q68DV7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF43Q68DV7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF43Q68DV7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF43Q68DV7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RNF43Q68DV7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF43Q68DV7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
RNF43Q68DV7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF43Q68DV7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF43Q68DV7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF43Q68DV7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF43Q68DV7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF43Q68DV7 UBE2DNL-204ENST00000602536 740 ntBASIC21.81■■□□□ 1.08
RNF43Q68DV7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF43Q68DV7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF43Q68DV7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF43Q68DV7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RNF43Q68DV7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 SLC7A5P1-201ENST00000568957 537 ntBASIC21.8■■□□□ 1.08
RNF43Q68DV7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 AC011767.1-201ENST00000617410 1153 ntBASIC21.8■■□□□ 1.08
RNF43Q68DV7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF43Q68DV7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF43Q68DV7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF43Q68DV7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF43Q68DV7 AC092667.1-201ENST00000434301 2586 ntBASIC21.79■■□□□ 1.08
RNF43Q68DV7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF43Q68DV7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF43Q68DV7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF43Q68DV7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF43Q68DV7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF43Q68DV7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF43Q68DV7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF43Q68DV7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF43Q68DV7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF43Q68DV7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF43Q68DV7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF43Q68DV7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 MYCNOS-205ENST00000641950 531 ntBASIC21.78■■□□□ 1.08
RNF43Q68DV7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF43Q68DV7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF43Q68DV7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
RNF43Q68DV7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF43Q68DV7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF43Q68DV7 AC003102.1-202ENST00000563394 1796 ntBASIC21.77■■□□□ 1.08
RNF43Q68DV7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF43Q68DV7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF43Q68DV7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF43Q68DV7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF43Q68DV7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF43Q68DV7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF43Q68DV7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF43Q68DV7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF43Q68DV7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF43Q68DV7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
RNF43Q68DV7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF43Q68DV7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms