Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 AC007322.3-201ENST00000426526 701 ntBASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 AC069544.1-201ENST00000609399 999 ntBASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 SNORA78-201ENST00000459373 127 ntBASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 AC233263.1-201ENST00000578059 224 ntBASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 Z99916.2-201ENST00000604037 246 ntBASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.58■□□□□ 0.89
LYSMD4Q5XG99 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD4Q5XG99 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD4Q5XG99 C11orf96-202ENST00000528572 1834 ntBASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.57■□□□□ 0.88
LYSMD4Q5XG99 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 AC093323.1-202ENST00000635031 2045 ntBASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD4Q5XG99 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 ECEL1P3-201ENST00000427961 737 ntBASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD4Q5XG99 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LYSMD4Q5XG99 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms