Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GARNL3Q5VVW2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GARNL3Q5VVW2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GARNL3Q5VVW2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 AC007322.1-201ENST00000426983 750 ntBASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 AC244015.2-201ENST00000616358 1861 ntBASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GARNL3Q5VVW2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 RBM17P2-201ENST00000616397 1405 ntBASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 AC245052.3-201ENST00000450182 901 ntBASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
GARNL3Q5VVW2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 CNN2P6-201ENST00000439038 900 ntBASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 PKD1P6-201ENST00000343738 4769 ntBASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GARNL3Q5VVW2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
GARNL3Q5VVW2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 AL121603.2-201ENST00000557373 2117 ntBASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.83■□□□□ 0.77
GARNL3Q5VVW2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GARNL3Q5VVW2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.83■□□□□ 0.76
GARNL3Q5VVW2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.83■□□□□ 0.76
GARNL3Q5VVW2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GARNL3Q5VVW2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.83■□□□□ 0.76
GARNL3Q5VVW2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 AL162412.1-201ENST00000567129 965 ntBASIC19.82■□□□□ 0.76
GARNL3Q5VVW2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms