Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRTCAP3Q53RY4 HLA-B-256ENST00000639848 1089 ntBASIC18.71■□□□□ 0.59
KRTCAP3Q53RY4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.71■□□□□ 0.59
KRTCAP3Q53RY4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRTCAP3Q53RY4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
KRTCAP3Q53RY4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRTCAP3Q53RY4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
KRTCAP3Q53RY4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 KRT18P68-201ENST00000392293 1000 ntBASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 AC007322.3-201ENST00000426526 701 ntBASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 RPS2P52-201ENST00000469610 820 ntBASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 AC060766.5-201ENST00000590539 871 ntBASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 C11orf96-202ENST00000528572 1834 ntBASIC18.7■□□□□ 0.58
KRTCAP3Q53RY4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 AC098590.1-201ENST00000468126 897 ntBASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 AC080038.3-201ENST00000623346 1952 ntBASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRTCAP3Q53RY4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRTCAP3Q53RY4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 AC010542.4-201ENST00000563151 1910 ntBASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 AL158047.1-201ENST00000445918 881 ntBASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.67■□□□□ 0.58
KRTCAP3Q53RY4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRTCAP3Q53RY4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms