Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN20Q4JDL3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN20Q4JDL3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PTPN20Q4JDL3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 MYCNOS-205ENST00000641950 531 ntBASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN20Q4JDL3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 SLC7A5P1-201ENST00000568957 537 ntBASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 PLK5-205ENST00000642079 1969 ntBASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PTPN20Q4JDL3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 AC245052.3-201ENST00000450182 901 ntBASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.92■■□□□ 1.1
PTPN20Q4JDL3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms