Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 AL034346.1-201ENST00000568244 1277 ntBASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ANKRD55Q3KP44 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 AC007225.1-201ENST00000566331 1836 ntBASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ANKRD55Q3KP44 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ANKRD55Q3KP44 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.27■□□□□ 0.35
ANKRD55Q3KP44 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.27■□□□□ 0.35
ANKRD55Q3KP44 AC121338.2-201ENST00000622535 1744 ntBASIC17.27■□□□□ 0.35
ANKRD55Q3KP44 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 UNC93B8-201ENST00000511903 705 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 pRNA.6-201ENST00000610482 90 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 pRNA.5-201ENST00000612139 90 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 pRNA.11-201ENST00000618423 90 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 pRNA.13-201ENST00000619112 90 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 AC241377.3-202ENST00000626088 1088 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 AC241585.3-202ENST00000628937 1088 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 AC245100.8-202ENST00000629247 1058 ntBASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ANKRD55Q3KP44 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 AL162377.1-201ENST00000618844 1793 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 AL512408.1-201ENST00000569378 2000 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 AC006455.2-201ENST00000429931 906 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 AC010141.3-201ENST00000456659 717 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 MIR6724-1-201ENST00000616420 92 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 MIR6724-2-201ENST00000616483 92 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 MIR6724-4-201ENST00000617390 92 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 MIR6724-3-201ENST00000622482 92 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 AC087239.1-201ENST00000622671 572 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 AP004607.7-201ENST00000527152 1677 ntBASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ANKRD55Q3KP44 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
ANKRD55Q3KP44 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ANKRD55Q3KP44 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ANKRD55Q3KP44 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ANKRD55Q3KP44 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ANKRD55Q3KP44 AL020996.1-203ENST00000536896 2307 ntBASIC17.24■□□□□ 0.35
ANKRD55Q3KP44 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ANKRD55Q3KP44 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms