Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-BQ31612 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 AC026471.6-201ENST00000622954 1905 ntBASIC20.35■□□□□ 0.85
HLA-BQ31612 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HLA-BQ31612 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-BQ31612 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-BQ31612 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
HLA-BQ31612 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HLA-BQ31612 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-BQ31612 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-BQ31612 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.35■□□□□ 0.85
HLA-BQ31612 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-BQ31612 SOX15-203ENST00000570788 1093 ntBASIC20.35■□□□□ 0.85
HLA-BQ31612 AC233263.1-201ENST00000578059 224 ntBASIC20.35■□□□□ 0.85
HLA-BQ31612 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-BQ31612 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-BQ31612 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-BQ31612 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
HLA-BQ31612 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-BQ31612 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-BQ31612 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.34■□□□□ 0.85
HLA-BQ31612 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-BQ31612 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-BQ31612 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-BQ31612 AC007322.3-201ENST00000426526 701 ntBASIC20.34■□□□□ 0.85
HLA-BQ31612 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-BQ31612 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.34■□□□□ 0.85
HLA-BQ31612 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-BQ31612 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-BQ31612 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
HLA-BQ31612 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HLA-BQ31612 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.33■□□□□ 0.85
HLA-BQ31612 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-BQ31612 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-BQ31612 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
HLA-BQ31612 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-BQ31612 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-BQ31612 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.33■□□□□ 0.85
HLA-BQ31612 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-BQ31612 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-BQ31612 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.33■□□□□ 0.85
HLA-BQ31612 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-BQ31612 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-BQ31612 Z99916.2-201ENST00000604037 246 ntBASIC20.33■□□□□ 0.85
HLA-BQ31612 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-BQ31612 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-BQ31612 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HLA-BQ31612 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HLA-BQ31612 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-BQ31612 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-BQ31612 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-BQ31612 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-BQ31612 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-BQ31612 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-BQ31612 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-BQ31612 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-BQ31612 AC010542.4-201ENST00000563151 1910 ntBASIC20.31■□□□□ 0.84
HLA-BQ31612 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-BQ31612 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HLA-BQ31612 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-BQ31612 AC069544.1-201ENST00000609399 999 ntBASIC20.31■□□□□ 0.84
HLA-BQ31612 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-BQ31612 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-BQ31612 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-BQ31612 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-BQ31612 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HLA-BQ31612 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-BQ31612 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms