Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH1Q08174 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH1Q08174 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH1Q08174 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH1Q08174 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDH1Q08174 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH1Q08174 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDH1Q08174 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH1Q08174 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH1Q08174 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH1Q08174 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH1Q08174 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH1Q08174 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDH1Q08174 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH1Q08174 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH1Q08174 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH1Q08174 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH1Q08174 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.08■□□□□ 0.81
PCDH1Q08174 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH1Q08174 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDH1Q08174 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH1Q08174 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH1Q08174 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH1Q08174 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDH1Q08174 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH1Q08174 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH1Q08174 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH1Q08174 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH1Q08174 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH1Q08174 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH1Q08174 SLC7A5P1-201ENST00000568957 537 ntBASIC20.07■□□□□ 0.8
PCDH1Q08174 AP001160.3-201ENST00000601484 763 ntBASIC20.07■□□□□ 0.8
PCDH1Q08174 AC104187.1-201ENST00000607510 612 ntBASIC20.07■□□□□ 0.8
PCDH1Q08174 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH1Q08174 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH1Q08174 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH1Q08174 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH1Q08174 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH1Q08174 RARRES2P11-201ENST00000635158 484 ntBASIC20.06■□□□□ 0.8
PCDH1Q08174 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH1Q08174 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDH1Q08174 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PCDH1Q08174 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH1Q08174 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDH1Q08174 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH1Q08174 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH1Q08174 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 PLK5-205ENST00000642079 1969 ntBASIC20.04■□□□□ 0.8
PCDH1Q08174 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PCDH1Q08174 AC006128.1-201ENST00000624704 1661 ntBASIC20.04■□□□□ 0.8
PCDH1Q08174 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 AC004854.2-201ENST00000608450 1441 ntBASIC20.04■□□□□ 0.8
PCDH1Q08174 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH1Q08174 AC097381.1-201ENST00000429019 1296 ntBASIC20.04■□□□□ 0.8
PCDH1Q08174 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH1Q08174 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH1Q08174 AC120498.10-201ENST00000621827 505 ntBASIC20.04■□□□□ 0.8
PCDH1Q08174 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms