Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 MYCNOS-205ENST00000641950 531 ntBASIC19.67■□□□□ 0.74
TNFRSF17Q02223 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFRSF17Q02223 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF17Q02223 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 KRT18P11-201ENST00000435214 1283 ntBASIC19.65■□□□□ 0.74
TNFRSF17Q02223 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 RARRES2P11-201ENST00000635158 484 ntBASIC19.65■□□□□ 0.74
TNFRSF17Q02223 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF17Q02223 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFRSF17Q02223 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF17Q02223 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 AC016769.1-201ENST00000409132 1010 ntBASIC19.63■□□□□ 0.73
TNFRSF17Q02223 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF17Q02223 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.62■□□□□ 0.73
TNFRSF17Q02223 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFRSF17Q02223 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms