Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YLR257WYLR257W 966 nt3.03□□□□□ -1.92
RPA49Q01080 RPS12YOR369C 432 nt3.03□□□□□ -1.92
RPA49Q01080 YPL142CYPL142C 318 nt3.03□□□□□ -1.92
RPA49Q01080 POP7YBR167C 423 nt3.03□□□□□ -1.92
RPA49Q01080 ANR2YKL047W 1551 nt3.03□□□□□ -1.92
RPA49Q01080 YCR099CYCR099C 468 nt3.02□□□□□ -1.93
RPA49Q01080 RSM24YDR175C 960 nt3.02□□□□□ -1.93
RPA49Q01080 YER158W-AYER158W-A 216 nt3.02□□□□□ -1.93
RPA49Q01080 YFR054CYFR054C 579 nt3.02□□□□□ -1.93
RPA49Q01080 ERP6YGL002W 651 nt3.02□□□□□ -1.93
RPA49Q01080 YIL046W-AYIL046W-A 165 nt3.02□□□□□ -1.93
RPA49Q01080 YJR020WYJR020W 333 nt3.02□□□□□ -1.93
RPA49Q01080 RPL16BYNL069C 597 nt3.02□□□□□ -1.93
RPA49Q01080 ATP11YNL315C 957 nt3.02□□□□□ -1.93
RPA49Q01080 ERG11YHR007C 1593 nt3.02□□□□□ -1.93
RPA49Q01080 NMA111YNL123W 2994 nt3.02□□□□□ -1.93
RPA49Q01080 STN1YDR082W 1485 nt3.02□□□□□ -1.93
RPA49Q01080 SLK19YOR195W 2466 nt3.01□□□□□ -1.93
RPA49Q01080 MET5YJR137C 4329 nt3.01□□□□□ -1.93
RPA49Q01080 DYN1YKR054C 12279 nt3.01□□□□□ -1.93
RPA49Q01080 KRE2YDR483W 1329 nt3.01□□□□□ -1.93
RPA49Q01080 MAK21YDR060W 3078 nt3.01□□□□□ -1.93
RPA49Q01080 YCR045W-AYCR045W-A 351 nt3.01□□□□□ -1.93
RPA49Q01080 NSE4YDL105W 1209 nt3.01□□□□□ -1.93
RPA49Q01080 UBC13YDR092W 462 nt3.01□□□□□ -1.93
RPA49Q01080 YGL159WYGL159W 1113 nt3.01□□□□□ -1.93
RPA49Q01080 LST7YGR057C 729 nt3.01□□□□□ -1.93
RPA49Q01080 SEC14YMR079W 915 nt3.01□□□□□ -1.93
RPA49Q01080 YNL203CYNL203C 612 nt3.01□□□□□ -1.93
RPA49Q01080 ATG3YNR007C 933 nt3.01□□□□□ -1.93
RPA49Q01080 YAT2YER024W 2772 nt3.01□□□□□ -1.93
RPA49Q01080 YIL082W-AYIL082W-A 4497 nt3.01□□□□□ -1.93
RPA49Q01080 BCH1YMR237W 2175 nt3.01□□□□□ -1.93
RPA49Q01080 VAS1YGR094W 3315 nt3.01□□□□□ -1.93
RPA49Q01080 CBP2YHL038C 1893 nt3.01□□□□□ -1.93
RPA49Q01080 UBP14YBR058C 2346 nt3.01□□□□□ -1.93
RPA49Q01080 YCK2YNL154C 1641 nt3.01□□□□□ -1.93
RPA49Q01080 RIM1YCR028C-A 408 nt3□□□□□ -1.93
RPA49Q01080 YDL158CYDL158C 309 nt3□□□□□ -1.93
RPA49Q01080 YDR203WYDR203W 318 nt3□□□□□ -1.93
RPA49Q01080 YEL050W-AYEL050W-A 192 nt3□□□□□ -1.93
RPA49Q01080 PGD1YGL025C 1194 nt3□□□□□ -1.93
RPA49Q01080 YGR160WYGR160W 612 nt3□□□□□ -1.93
RPA49Q01080 MRPL38YKL170W 417 nt3□□□□□ -1.93
RPA49Q01080 SRL3YKR091W 741 nt3□□□□□ -1.93
RPA49Q01080 ARC18YLR370C 537 nt3□□□□□ -1.93
RPA49Q01080 NBP1YLR457C 960 nt3□□□□□ -1.93
RPA49Q01080 ADI1YMR009W 540 nt3□□□□□ -1.93
RPA49Q01080 PAI3YMR174C 207 nt3□□□□□ -1.93
RPA49Q01080 GRE2YOL151W 1029 nt3□□□□□ -1.93
RPA49Q01080 YOR385WYOR385W 873 nt3□□□□□ -1.93
RPA49Q01080 MBA1YBR185C 837 nt3□□□□□ -1.93
RPA49Q01080 ROM1YGR070W 3468 nt3□□□□□ -1.93
RPA49Q01080 AGE1YDR524C 1449 nt3□□□□□ -1.93
RPA49Q01080 JJJ2YJL162C 1752 nt3□□□□□ -1.93
RPA49Q01080 YKL100CYKL100C 1764 nt3□□□□□ -1.93
RPA49Q01080 BRE5YNR051C 1548 nt2.99□□□□□ -1.93
RPA49Q01080 SRB4YER022W 2064 nt2.99□□□□□ -1.93
RPA49Q01080 GYP7YDL234C 2241 nt2.99□□□□□ -1.93
RPA49Q01080 YDR248CYDR248C 582 nt2.99□□□□□ -1.93
RPA49Q01080 RRT13YER066W 558 nt2.99□□□□□ -1.93
RPA49Q01080 YJL133C-AYJL133C-A 225 nt2.99□□□□□ -1.93
RPA49Q01080 YKR033CYKR033C 426 nt2.99□□□□□ -1.93
RPA49Q01080 YPL119C-AYPL119C-A 264 nt2.99□□□□□ -1.93
RPA49Q01080 BPT1YLL015W 4680 nt2.99□□□□□ -1.93
RPA49Q01080 NOP12YOL041C 1380 nt2.99□□□□□ -1.93
RPA49Q01080 BRX1YOL077C 876 nt2.98□□□□□ -1.93
RPA49Q01080 YOR277CYOR277C 309 nt2.98□□□□□ -1.93
RPA49Q01080 ATG13YPR185W 2217 nt2.98□□□□□ -1.93
RPA49Q01080 TSC11YER093C 4293 nt2.98□□□□□ -1.93
RPA49Q01080 CEP3YMR168C 1827 nt2.98□□□□□ -1.93
RPA49Q01080 ICR1ICR1 3199 nt2.98□□□□□ -1.93
RPA49Q01080 VAC8YEL013W 1737 nt2.97□□□□□ -1.93
RPA49Q01080 MED1YPR070W 1701 nt2.97□□□□□ -1.93
RPA49Q01080 YCR013CYCR013C 648 nt2.97□□□□□ -1.93
RPA49Q01080 GPM2YDL021W 936 nt2.97□□□□□ -1.93
RPA49Q01080 YEA4YEL004W 1029 nt2.97□□□□□ -1.93
RPA49Q01080 YER066C-AYER066C-A 501 nt2.97□□□□□ -1.93
RPA49Q01080 YHL044WYHL044W 708 nt2.97□□□□□ -1.93
RPA49Q01080 RPS21BYJL136C 264 nt2.97□□□□□ -1.93
RPA49Q01080 RCN1YKL159C 636 nt2.97□□□□□ -1.93
RPA49Q01080 YLL044WYLL044W 447 nt2.97□□□□□ -1.93
RPA49Q01080 VMA6YLR447C 1038 nt2.97□□□□□ -1.93
RPA49Q01080 YOR331CYOR331C 558 nt2.97□□□□□ -1.93
RPA49Q01080 ARK1YNL020C 1917 nt2.97□□□□□ -1.93
RPA49Q01080 SNQ2YDR011W 4506 nt2.97□□□□□ -1.93
RPA49Q01080 LST4YKL176C 2487 nt2.96□□□□□ -1.94
RPA49Q01080 AVT2YEL064C 1443 nt2.96□□□□□ -1.94
RPA49Q01080 YDR262WYDR262W 819 nt2.96□□□□□ -1.94
RPA49Q01080 KEI1YDR367W 666 nt2.96□□□□□ -1.94
RPA49Q01080 RSM28YDR494W 1086 nt2.96□□□□□ -1.94
RPA49Q01080 PHD1YKL043W 1101 nt2.96□□□□□ -1.94
RPA49Q01080 YML037CYML037C 1023 nt2.96□□□□□ -1.94
RPA49Q01080 ATX1YNL259C 222 nt2.96□□□□□ -1.94
RPA49Q01080 SUS1YBR111W-A 291 nt2.96□□□□□ -1.94
RPA49Q01080 CBP6YBR120C 489 nt2.96□□□□□ -1.94
RPA49Q01080 PDC2YDR081C 2778 nt2.96□□□□□ -1.94
RPA49Q01080 GIS4YML006C 2325 nt2.96□□□□□ -1.94
RPA49Q01080 ERT1YBR239C 1590 nt2.95□□□□□ -1.94
RPA49Q01080 YLR446WYLR446W 1302 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms