Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.58■■□□□ 1.05
IRX4P78413 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
IRX4P78413 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.58■■□□□ 1.05
IRX4P78413 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
IRX4P78413 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.58■■□□□ 1.05
IRX4P78413 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.58■■□□□ 1.04
IRX4P78413 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IRX4P78413 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
IRX4P78413 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IRX4P78413 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
IRX4P78413 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
IRX4P78413 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.57■■□□□ 1.04
IRX4P78413 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
IRX4P78413 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.57■■□□□ 1.04
IRX4P78413 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
IRX4P78413 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
IRX4P78413 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.57■■□□□ 1.04
IRX4P78413 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.57■■□□□ 1.04
IRX4P78413 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.57■■□□□ 1.04
IRX4P78413 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.57■■□□□ 1.04
IRX4P78413 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.57■■□□□ 1.04
IRX4P78413 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
IRX4P78413 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
IRX4P78413 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.57■■□□□ 1.04
IRX4P78413 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
IRX4P78413 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
IRX4P78413 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.56■■□□□ 1.04
IRX4P78413 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.56■■□□□ 1.04
IRX4P78413 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
IRX4P78413 AC010141.3-201ENST00000456659 717 ntBASIC21.56■■□□□ 1.04
IRX4P78413 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
IRX4P78413 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.56■■□□□ 1.04
IRX4P78413 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
IRX4P78413 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
IRX4P78413 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IRX4P78413 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX4P78413 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IRX4P78413 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX4P78413 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX4P78413 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.55■■□□□ 1.04
IRX4P78413 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.55■■□□□ 1.04
IRX4P78413 AC087239.1-201ENST00000622671 572 ntBASIC21.55■■□□□ 1.04
IRX4P78413 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.55■■□□□ 1.04
IRX4P78413 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX4P78413 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IRX4P78413 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.55■■□□□ 1.04
IRX4P78413 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IRX4P78413 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
IRX4P78413 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.54■■□□□ 1.04
IRX4P78413 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
IRX4P78413 GUSBP6-202ENST00000438529 1198 ntBASIC21.54■■□□□ 1.04
IRX4P78413 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
IRX4P78413 SLC7A5P2-201ENST00000553010 536 ntBASIC21.54■■□□□ 1.04
IRX4P78413 AL138781.1-201ENST00000566567 1274 ntBASIC21.54■■□□□ 1.04
IRX4P78413 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.54■■□□□ 1.04
IRX4P78413 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.54■■□□□ 1.04
IRX4P78413 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.54■■□□□ 1.04
IRX4P78413 AC231657.2-201ENST00000624556 255 ntBASIC21.54■■□□□ 1.04
IRX4P78413 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.54■■□□□ 1.04
IRX4P78413 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX4P78413 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX4P78413 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
IRX4P78413 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.53■■□□□ 1.04
IRX4P78413 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX4P78413 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IRX4P78413 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.53■■□□□ 1.04
IRX4P78413 DUX4L16-201ENST00000555130 1264 ntBASIC21.53■■□□□ 1.04
IRX4P78413 MIR4651-201ENST00000582622 73 ntBASIC21.53■■□□□ 1.04
IRX4P78413 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.53■■□□□ 1.04
IRX4P78413 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.53■■□□□ 1.04
IRX4P78413 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX4P78413 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX4P78413 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms