Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.83■■□□□ 1.41
CCNA1P78396 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.83■■□□□ 1.41
CCNA1P78396 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.83■■□□□ 1.41
CCNA1P78396 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.83■■□□□ 1.41
CCNA1P78396 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
CCNA1P78396 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.83■■□□□ 1.41
CCNA1P78396 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.83■■□□□ 1.41
CCNA1P78396 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.83■■□□□ 1.41
CCNA1P78396 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNA1P78396 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCNA1P78396 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCNA1P78396 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.82■■□□□ 1.4
CCNA1P78396 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.82■■□□□ 1.4
CCNA1P78396 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CCNA1P78396 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.82■■□□□ 1.4
CCNA1P78396 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCNA1P78396 RPPH1-201ENST00000516869 333 ntBASIC23.82■■□□□ 1.4
CCNA1P78396 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.82■■□□□ 1.4
CCNA1P78396 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.81■■□□□ 1.4
CCNA1P78396 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNA1P78396 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNA1P78396 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNA1P78396 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.81■■□□□ 1.4
CCNA1P78396 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.81■■□□□ 1.4
CCNA1P78396 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CCNA1P78396 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNA1P78396 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.81■■□□□ 1.4
CCNA1P78396 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.81■■□□□ 1.4
CCNA1P78396 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.81■■□□□ 1.4
CCNA1P78396 C1QBPP2-201ENST00000528754 825 ntBASIC23.81■■□□□ 1.4
CCNA1P78396 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCNA1P78396 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.81■■□□□ 1.4
CCNA1P78396 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCNA1P78396 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.81■■□□□ 1.4
CCNA1P78396 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNA1P78396 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCNA1P78396 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNA1P78396 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.8■■□□□ 1.4
CCNA1P78396 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.8■■□□□ 1.4
CCNA1P78396 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.8■■□□□ 1.4
CCNA1P78396 AC010542.4-201ENST00000563151 1910 ntBASIC23.8■■□□□ 1.4
CCNA1P78396 AC026471.6-201ENST00000622954 1905 ntBASIC23.8■■□□□ 1.4
CCNA1P78396 AC127496.7-201ENST00000625110 1798 ntBASIC23.8■■□□□ 1.4
CCNA1P78396 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CCNA1P78396 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.8■■□□□ 1.4
CCNA1P78396 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNA1P78396 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.79■■□□□ 1.4
CCNA1P78396 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CCNA1P78396 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNA1P78396 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.79■■□□□ 1.4
CCNA1P78396 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNA1P78396 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNA1P78396 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CCNA1P78396 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNA1P78396 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.78■■□□□ 1.4
CCNA1P78396 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNA1P78396 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CCNA1P78396 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
CCNA1P78396 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.78■■□□□ 1.4
CCNA1P78396 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.78■■□□□ 1.4
CCNA1P78396 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 RN7SL471P-201ENST00000580476 299 ntBASIC23.78■■□□□ 1.4
CCNA1P78396 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNA1P78396 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNA1P78396 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms