Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBA52P62987 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.86■□□□□ 0.45
UBA52P62987 Z98882.1-201ENST00000622160 2253 ntBASIC17.86■□□□□ 0.45
UBA52P62987 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.86■□□□□ 0.45
UBA52P62987 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBA52P62987 KRT18P14-201ENST00000534205 1250 ntBASIC17.86■□□□□ 0.45
UBA52P62987 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.86■□□□□ 0.45
UBA52P62987 NTF6G-201ENST00000591094 616 ntBASIC17.86■□□□□ 0.45
UBA52P62987 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBA52P62987 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.86■□□□□ 0.45
UBA52P62987 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.86■□□□□ 0.45
UBA52P62987 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA52P62987 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
UBA52P62987 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.85■□□□□ 0.45
UBA52P62987 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.85■□□□□ 0.45
UBA52P62987 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
UBA52P62987 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UBA52P62987 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.85■□□□□ 0.45
UBA52P62987 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.85■□□□□ 0.45
UBA52P62987 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.85■□□□□ 0.45
UBA52P62987 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.85■□□□□ 0.45
UBA52P62987 LINC02228-203ENST00000641970 1355 ntBASIC17.85■□□□□ 0.45
UBA52P62987 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBA52P62987 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
UBA52P62987 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBA52P62987 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
UBA52P62987 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.84■□□□□ 0.45
UBA52P62987 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 AL499627.2-201ENST00000606283 725 ntBASIC17.84■□□□□ 0.45
UBA52P62987 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA52P62987 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UBA52P62987 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBA52P62987 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.84■□□□□ 0.45
UBA52P62987 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBA52P62987 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UBA52P62987 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
UBA52P62987 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
UBA52P62987 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBA52P62987 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBA52P62987 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.83■□□□□ 0.45
UBA52P62987 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.83■□□□□ 0.45
UBA52P62987 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.83■□□□□ 0.45
UBA52P62987 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBA52P62987 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.83■□□□□ 0.45
UBA52P62987 ID1-201ENST00000376105 1233 ntBASIC17.83■□□□□ 0.44
UBA52P62987 OR2I1P-207ENST00000453522 948 ntBASIC17.83■□□□□ 0.44
UBA52P62987 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.83■□□□□ 0.44
UBA52P62987 TERF1P2-201ENST00000583350 1212 ntBASIC17.83■□□□□ 0.44
UBA52P62987 AC010525.1-201ENST00000585559 441 ntBASIC17.83■□□□□ 0.44
UBA52P62987 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBA52P62987 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBA52P62987 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA52P62987 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA52P62987 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA52P62987 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBA52P62987 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.83■□□□□ 0.44
UBA52P62987 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBA52P62987 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.82■□□□□ 0.44
UBA52P62987 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBA52P62987 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBA52P62987 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBA52P62987 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.82■□□□□ 0.44
UBA52P62987 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.82■□□□□ 0.44
UBA52P62987 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBA52P62987 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UBA52P62987 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.82■□□□□ 0.44
UBA52P62987 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBA52P62987 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.82■□□□□ 0.44
UBA52P62987 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.82■□□□□ 0.44
UBA52P62987 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.82■□□□□ 0.44
UBA52P62987 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms