Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS3AP61247 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.42■□□□□ 0.7
RPS3AP61247 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.42■□□□□ 0.7
RPS3AP61247 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPS3AP61247 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RPS3AP61247 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPS3AP61247 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.41■□□□□ 0.7
RPS3AP61247 AC087623.3-201ENST00000607047 1098 ntBASIC19.41■□□□□ 0.7
RPS3AP61247 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RPS3AP61247 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPS3AP61247 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPS3AP61247 OR7E47P-201ENST00000546390 1422 ntBASIC19.41■□□□□ 0.7
RPS3AP61247 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS3AP61247 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RPS3AP61247 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.4■□□□□ 0.7
RPS3AP61247 Z98882.1-201ENST00000622160 2253 ntBASIC19.4■□□□□ 0.7
RPS3AP61247 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
RPS3AP61247 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS3AP61247 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPS3AP61247 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RPS3AP61247 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
RPS3AP61247 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RPS3AP61247 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.39■□□□□ 0.69
RPS3AP61247 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS3AP61247 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPS3AP61247 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.39■□□□□ 0.69
RPS3AP61247 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPS3AP61247 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.39■□□□□ 0.69
RPS3AP61247 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS3AP61247 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS3AP61247 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPS3AP61247 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPS3AP61247 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.39■□□□□ 0.69
RPS3AP61247 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS3AP61247 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPS3AP61247 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RPS3AP61247 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS3AP61247 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RPS3AP61247 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS3AP61247 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RPS3AP61247 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPS3AP61247 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPS3AP61247 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS3AP61247 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.38■□□□□ 0.69
RPS3AP61247 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.38■□□□□ 0.69
RPS3AP61247 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPS3AP61247 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPS3AP61247 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.38■□□□□ 0.69
RPS3AP61247 AL034346.1-201ENST00000568244 1277 ntBASIC19.38■□□□□ 0.69
RPS3AP61247 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.38■□□□□ 0.69
RPS3AP61247 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.38■□□□□ 0.69
RPS3AP61247 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.38■□□□□ 0.69
RPS3AP61247 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.37■□□□□ 0.69
RPS3AP61247 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS3AP61247 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 FEM1AP4-201ENST00000443167 1987 ntBASIC19.37■□□□□ 0.69
RPS3AP61247 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS3AP61247 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RPS3AP61247 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS3AP61247 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 AC009237.3-201ENST00000393279 1427 ntBASIC19.37■□□□□ 0.69
RPS3AP61247 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS3AP61247 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RPS3AP61247 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.37■□□□□ 0.69
RPS3AP61247 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.37■□□□□ 0.69
RPS3AP61247 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.37■□□□□ 0.69
RPS3AP61247 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.37■□□□□ 0.69
RPS3AP61247 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS3AP61247 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms