Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
AP3S2P59780 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3S2P59780 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.89■□□□□ 0.45
AP3S2P59780 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
AP3S2P59780 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3S2P59780 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
AP3S2P59780 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3S2P59780 AL499627.2-201ENST00000606283 725 ntBASIC17.88■□□□□ 0.45
AP3S2P59780 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3S2P59780 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S2P59780 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3S2P59780 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
AP3S2P59780 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 AL034346.1-201ENST00000568244 1277 ntBASIC17.87■□□□□ 0.45
AP3S2P59780 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
AP3S2P59780 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
AP3S2P59780 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3S2P59780 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S2P59780 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
AP3S2P59780 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S2P59780 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AP3S2P59780 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S2P59780 BHLHE23-202ENST00000612929 1109 ntBASIC17.86■□□□□ 0.45
AP3S2P59780 AC074183.2-201ENST00000623112 922 ntBASIC17.86■□□□□ 0.45
AP3S2P59780 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S2P59780 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S2P59780 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.86■□□□□ 0.45
AP3S2P59780 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S2P59780 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S2P59780 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S2P59780 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S2P59780 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.85■□□□□ 0.45
AP3S2P59780 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S2P59780 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
AP3S2P59780 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S2P59780 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S2P59780 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
AP3S2P59780 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3S2P59780 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S2P59780 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3S2P59780 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.85■□□□□ 0.45
AP3S2P59780 AC009102.2-201ENST00000606772 1639 ntBASIC17.85■□□□□ 0.45
AP3S2P59780 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3S2P59780 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S2P59780 AC090340.1-201ENST00000620778 4980 ntBASIC17.84■□□□□ 0.45
AP3S2P59780 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S2P59780 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP3S2P59780 AC007225.1-201ENST00000566331 1836 ntBASIC17.84■□□□□ 0.45
AP3S2P59780 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
AP3S2P59780 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S2P59780 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S2P59780 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S2P59780 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S2P59780 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S2P59780 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S2P59780 MIR4449-201ENST00000578365 66 ntBASIC17.84■□□□□ 0.45
AP3S2P59780 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S2P59780 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3S2P59780 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP3S2P59780 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S2P59780 AC121338.2-201ENST00000622535 1744 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms