Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.59■□□□□ 0.57
CLRN1P58418 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.59■□□□□ 0.57
CLRN1P58418 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.59■□□□□ 0.57
CLRN1P58418 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.59■□□□□ 0.57
CLRN1P58418 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.59■□□□□ 0.57
CLRN1P58418 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLRN1P58418 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLRN1P58418 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLRN1P58418 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLRN1P58418 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLRN1P58418 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CLRN1P58418 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLRN1P58418 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.58■□□□□ 0.57
CLRN1P58418 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.58■□□□□ 0.57
CLRN1P58418 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLRN1P58418 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CLRN1P58418 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.58■□□□□ 0.57
CLRN1P58418 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CLRN1P58418 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.58■□□□□ 0.56
CLRN1P58418 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 POU5F1P4-201ENST00000413175 1085 ntBASIC18.58■□□□□ 0.56
CLRN1P58418 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.58■□□□□ 0.56
CLRN1P58418 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.58■□□□□ 0.56
CLRN1P58418 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.58■□□□□ 0.56
CLRN1P58418 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.58■□□□□ 0.56
CLRN1P58418 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 AC061975.6-201ENST00000579045 1553 ntBASIC18.58■□□□□ 0.56
CLRN1P58418 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLRN1P58418 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
CLRN1P58418 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLRN1P58418 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLRN1P58418 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.57■□□□□ 0.56
CLRN1P58418 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.57■□□□□ 0.56
CLRN1P58418 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CLRN1P58418 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.57■□□□□ 0.56
CLRN1P58418 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.57■□□□□ 0.56
CLRN1P58418 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.57■□□□□ 0.56
CLRN1P58418 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.57■□□□□ 0.56
CLRN1P58418 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.57■□□□□ 0.56
CLRN1P58418 AC138907.5-202ENST00000569484 235 ntBASIC18.57■□□□□ 0.56
CLRN1P58418 AC120498.10-201ENST00000621827 505 ntBASIC18.57■□□□□ 0.56
CLRN1P58418 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.57■□□□□ 0.56
CLRN1P58418 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLRN1P58418 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLRN1P58418 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLRN1P58418 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLRN1P58418 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLRN1P58418 AC104187.1-201ENST00000607510 612 ntBASIC18.56■□□□□ 0.56
CLRN1P58418 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLRN1P58418 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLRN1P58418 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLRN1P58418 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLRN1P58418 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLRN1P58418 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.55■□□□□ 0.56
CLRN1P58418 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLRN1P58418 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLRN1P58418 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLRN1P58418 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLRN1P58418 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLRN1P58418 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.55■□□□□ 0.56
CLRN1P58418 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.55■□□□□ 0.56
CLRN1P58418 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.55■□□□□ 0.56
CLRN1P58418 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.55■□□□□ 0.56
CLRN1P58418 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4L2-201ENST00000561772 1275 ntBASIC18.55■□□□□ 0.56
CLRN1P58418 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.55■□□□□ 0.56
CLRN1P58418 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
CLRN1P58418 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4L6-201ENST00000626483 1275 ntBASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4L1-201ENST00000627662 1275 ntBASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4L8-201ENST00000629013 1275 ntBASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4L3-201ENST00000630187 1275 ntBASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4L7-201ENST00000630678 1275 ntBASIC18.55■□□□□ 0.56
CLRN1P58418 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLRN1P58418 DUX4L5-201ENST00000630834 1275 ntBASIC18.55■□□□□ 0.56
CLRN1P58418 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLRN1P58418 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.54■□□□□ 0.56
CLRN1P58418 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLRN1P58418 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.54■□□□□ 0.56
CLRN1P58418 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLRN1P58418 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.54■□□□□ 0.56
CLRN1P58418 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLRN1P58418 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
CLRN1P58418 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLRN1P58418 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.54■□□□□ 0.56
CLRN1P58418 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CLRN1P58418 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms