Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH6P55285 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH6P55285 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH6P55285 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH6P55285 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH6P55285 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH6P55285 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH6P55285 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CDH6P55285 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH6P55285 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH6P55285 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.64■■□□□ 1.05
CDH6P55285 AC010141.2-201ENST00000452426 721 ntBASIC21.64■■□□□ 1.05
CDH6P55285 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH6P55285 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.64■■□□□ 1.05
CDH6P55285 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH6P55285 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CDH6P55285 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH6P55285 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH6P55285 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH6P55285 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH6P55285 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH6P55285 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH6P55285 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDH6P55285 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDH6P55285 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH6P55285 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDH6P55285 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH6P55285 AC097381.1-201ENST00000429019 1296 ntBASIC21.63■■□□□ 1.05
CDH6P55285 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.63■■□□□ 1.05
CDH6P55285 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.63■■□□□ 1.05
CDH6P55285 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.63■■□□□ 1.05
CDH6P55285 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH6P55285 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.63■■□□□ 1.05
CDH6P55285 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH6P55285 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH6P55285 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH6P55285 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
CDH6P55285 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH6P55285 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH6P55285 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
CDH6P55285 PLK5-205ENST00000642079 1969 ntBASIC21.62■■□□□ 1.05
CDH6P55285 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH6P55285 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.62■■□□□ 1.05
CDH6P55285 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.62■■□□□ 1.05
CDH6P55285 MIR6821-201ENST00000617625 74 ntBASIC21.62■■□□□ 1.05
CDH6P55285 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
CDH6P55285 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDH6P55285 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.62■■□□□ 1.05
CDH6P55285 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.62■■□□□ 1.05
CDH6P55285 AC004854.2-201ENST00000608450 1441 ntBASIC21.62■■□□□ 1.05
CDH6P55285 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH6P55285 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CDH6P55285 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDH6P55285 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH6P55285 DUX4L2-201ENST00000561772 1275 ntBASIC21.61■■□□□ 1.05
CDH6P55285 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.61■■□□□ 1.05
CDH6P55285 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.61■■□□□ 1.05
CDH6P55285 AP001160.3-201ENST00000601484 763 ntBASIC21.61■■□□□ 1.05
CDH6P55285 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
CDH6P55285 DUX4L6-201ENST00000626483 1275 ntBASIC21.61■■□□□ 1.05
CDH6P55285 DUX4L1-201ENST00000627662 1275 ntBASIC21.61■■□□□ 1.05
CDH6P55285 DUX4L8-201ENST00000629013 1275 ntBASIC21.61■■□□□ 1.05
CDH6P55285 DUX4L3-201ENST00000630187 1275 ntBASIC21.61■■□□□ 1.05
CDH6P55285 DUX4L7-201ENST00000630678 1275 ntBASIC21.61■■□□□ 1.05
CDH6P55285 DUX4L5-201ENST00000630834 1275 ntBASIC21.61■■□□□ 1.05
CDH6P55285 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDH6P55285 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDH6P55285 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH6P55285 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms