Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS2P54278 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS2P54278 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PMS2P54278 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
PMS2P54278 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PMS2P54278 PCDHAC2-203ENST00000615316 3011 ntBASIC21.47■■□□□ 1.03
PMS2P54278 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS2P54278 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PMS2P54278 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.47■■□□□ 1.03
PMS2P54278 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.47■■□□□ 1.03
PMS2P54278 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
PMS2P54278 DUX4L19-201ENST00000557448 1267 ntBASIC21.47■■□□□ 1.03
PMS2P54278 MIR3181-201ENST00000578512 73 ntBASIC21.47■■□□□ 1.03
PMS2P54278 AC092666.2-201ENST00000613287 246 ntBASIC21.47■■□□□ 1.03
PMS2P54278 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PMS2P54278 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS2P54278 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.47■■□□□ 1.03
PMS2P54278 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
PMS2P54278 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS2P54278 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
PMS2P54278 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PMS2P54278 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.46■■□□□ 1.03
PMS2P54278 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.46■■□□□ 1.03
PMS2P54278 AFG3L1P-217ENST00000557444 2447 ntBASIC21.46■■□□□ 1.03
PMS2P54278 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PMS2P54278 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PMS2P54278 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.46■■□□□ 1.03
PMS2P54278 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PMS2P54278 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.46■■□□□ 1.03
PMS2P54278 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.46■■□□□ 1.03
PMS2P54278 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS2P54278 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.45■■□□□ 1.03
PMS2P54278 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.45■■□□□ 1.02
PMS2P54278 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.45■■□□□ 1.02
PMS2P54278 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PMS2P54278 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PMS2P54278 MIR5787-201ENST00000611784 55 ntBASIC21.45■■□□□ 1.02
PMS2P54278 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 AC027702.1-201ENST00000563810 1770 ntBASIC21.45■■□□□ 1.02
PMS2P54278 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PMS2P54278 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS2P54278 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PMS2P54278 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PMS2P54278 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PMS2P54278 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS2P54278 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PMS2P54278 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.44■■□□□ 1.02
PMS2P54278 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PMS2P54278 AC010525.1-201ENST00000585559 441 ntBASIC21.44■■□□□ 1.02
PMS2P54278 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.44■■□□□ 1.02
PMS2P54278 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.44■■□□□ 1.02
PMS2P54278 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.44■■□□□ 1.02
PMS2P54278 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS2P54278 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS2P54278 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PMS2P54278 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.43■■□□□ 1.02
PMS2P54278 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.43■■□□□ 1.02
PMS2P54278 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.43■■□□□ 1.02
PMS2P54278 AC105265.2-201ENST00000467189 838 ntBASIC21.43■■□□□ 1.02
PMS2P54278 AF213884.3-201ENST00000563833 479 ntBASIC21.43■■□□□ 1.02
PMS2P54278 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.43■■□□□ 1.02
PMS2P54278 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.43■■□□□ 1.02
PMS2P54278 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PMS2P54278 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PMS2P54278 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.43■■□□□ 1.02
PMS2P54278 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS2P54278 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PMS2P54278 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PMS2P54278 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMS2P54278 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMS2P54278 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMS2P54278 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.42■■□□□ 1.02
PMS2P54278 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
PMS2P54278 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMS2P54278 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PMS2P54278 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms