Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PDX1P52945 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.26■□□□□ 0.83
PDX1P52945 RBM17P2-201ENST00000616397 1405 ntBASIC20.26■□□□□ 0.83
PDX1P52945 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDX1P52945 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.25■□□□□ 0.83
PDX1P52945 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.25■□□□□ 0.83
PDX1P52945 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDX1P52945 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 KRT18P29-201ENST00000397031 1267 ntBASIC20.25■□□□□ 0.83
PDX1P52945 POU5F1P4-201ENST00000413175 1085 ntBASIC20.25■□□□□ 0.83
PDX1P52945 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDX1P52945 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PDX1P52945 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDX1P52945 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 AC120498.10-201ENST00000621827 505 ntBASIC20.25■□□□□ 0.83
PDX1P52945 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
PDX1P52945 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
PDX1P52945 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
PDX1P52945 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.25■□□□□ 0.83
PDX1P52945 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDX1P52945 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.24■□□□□ 0.83
PDX1P52945 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.24■□□□□ 0.83
PDX1P52945 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.24■□□□□ 0.83
PDX1P52945 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.24■□□□□ 0.83
PDX1P52945 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.24■□□□□ 0.83
PDX1P52945 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.24■□□□□ 0.83
PDX1P52945 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 KRT16P2-201ENST00000414673 1423 ntBASIC20.24■□□□□ 0.83
PDX1P52945 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
PDX1P52945 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.24■□□□□ 0.83
PDX1P52945 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.24■□□□□ 0.83
PDX1P52945 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
PDX1P52945 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDX1P52945 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDX1P52945 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDX1P52945 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.23■□□□□ 0.83
PDX1P52945 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDX1P52945 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDX1P52945 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.23■□□□□ 0.83
PDX1P52945 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDX1P52945 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDX1P52945 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.23■□□□□ 0.83
PDX1P52945 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDX1P52945 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.23■□□□□ 0.83
PDX1P52945 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDX1P52945 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.23■□□□□ 0.83
PDX1P52945 AC098590.1-201ENST00000468126 897 ntBASIC20.23■□□□□ 0.83
PDX1P52945 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.23■□□□□ 0.83
PDX1P52945 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.23■□□□□ 0.83
PDX1P52945 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDX1P52945 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDX1P52945 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.23■□□□□ 0.83
PDX1P52945 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDX1P52945 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDX1P52945 C11orf96-202ENST00000528572 1834 ntBASIC20.23■□□□□ 0.83
PDX1P52945 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDX1P52945 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDX1P52945 AC010980.2-201ENST00000587099 1412 ntBASIC20.22■□□□□ 0.83
PDX1P52945 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDX1P52945 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PDX1P52945 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.22■□□□□ 0.83
PDX1P52945 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.22■□□□□ 0.83
PDX1P52945 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.22■□□□□ 0.83
PDX1P52945 AL162412.1-201ENST00000567129 965 ntBASIC20.22■□□□□ 0.83
PDX1P52945 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.22■□□□□ 0.83
PDX1P52945 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.22■□□□□ 0.83
PDX1P52945 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDX1P52945 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms