Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF140P52738 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF140P52738 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF140P52738 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF140P52738 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF140P52738 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF140P52738 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF140P52738 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 MIR935-201ENST00000401179 91 ntBASIC20.78■□□□□ 0.92
ZNF140P52738 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF140P52738 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF140P52738 MYCNOS-205ENST00000641950 531 ntBASIC20.78■□□□□ 0.92
ZNF140P52738 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF140P52738 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF140P52738 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF140P52738 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF140P52738 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
ZNF140P52738 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.77■□□□□ 0.92
ZNF140P52738 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.77■□□□□ 0.92
ZNF140P52738 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ZNF140P52738 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF140P52738 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF140P52738 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
ZNF140P52738 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.77■□□□□ 0.91
ZNF140P52738 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF140P52738 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
ZNF140P52738 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF140P52738 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZNF140P52738 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.76■□□□□ 0.91
ZNF140P52738 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.76■□□□□ 0.91
ZNF140P52738 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF140P52738 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.76■□□□□ 0.91
ZNF140P52738 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF140P52738 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
ZNF140P52738 RBM17P2-201ENST00000616397 1405 ntBASIC20.76■□□□□ 0.91
ZNF140P52738 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF140P52738 PLK5-205ENST00000642079 1969 ntBASIC20.76■□□□□ 0.91
ZNF140P52738 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF140P52738 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 AC137761.2-201ENST00000561729 223 ntBASIC20.75■□□□□ 0.91
ZNF140P52738 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF140P52738 AC145350.3-201ENST00000569033 163 ntBASIC20.75■□□□□ 0.91
ZNF140P52738 AC243732.1-201ENST00000612648 864 ntBASIC20.75■□□□□ 0.91
ZNF140P52738 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF140P52738 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ZNF140P52738 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNF140P52738 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF140P52738 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
ZNF140P52738 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.74■□□□□ 0.91
ZNF140P52738 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.74■□□□□ 0.91
ZNF140P52738 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms