Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YAR069CYAR069C 294 nt2.83□□□□□ -1.96
SSN8P47821 ARC18YLR370C 537 nt2.83□□□□□ -1.96
SSN8P47821 YMR187CYMR187C 1296 nt2.83□□□□□ -1.96
SSN8P47821 YNL109WYNL109W 546 nt2.83□□□□□ -1.96
SSN8P47821 CSI2YOL007C 1026 nt2.83□□□□□ -1.96
SSN8P47821 YOL029CYOL029C 606 nt2.83□□□□□ -1.96
SSN8P47821 YOR283WYOR283W 693 nt2.83□□□□□ -1.96
SSN8P47821 REC8YPR007C 2043 nt2.83□□□□□ -1.96
SSN8P47821 RED1YLR263W 2484 nt2.82□□□□□ -1.96
SSN8P47821 DRS2YAL026C 4068 nt2.82□□□□□ -1.96
SSN8P47821 YCR013CYCR013C 648 nt2.82□□□□□ -1.96
SSN8P47821 PBP4YDL053C 558 nt2.82□□□□□ -1.96
SSN8P47821 CRD1YDL142C 852 nt2.82□□□□□ -1.96
SSN8P47821 CPR5YDR304C 678 nt2.82□□□□□ -1.96
SSN8P47821 DIG2YDR480W 972 nt2.82□□□□□ -1.96
SSN8P47821 RPL11BYGR085C 525 nt2.82□□□□□ -1.96
SSN8P47821 YIL175WYIL175W 318 nt2.82□□□□□ -1.96
SSN8P47821 YJL222W-BYJL222W-B 138 nt2.82□□□□□ -1.96
SSN8P47821 VPS20YMR077C 666 nt2.82□□□□□ -1.96
SSN8P47821 YNL089CYNL089C 477 nt2.82□□□□□ -1.96
SSN8P47821 GIM3YNL153C 390 nt2.82□□□□□ -1.96
SSN8P47821 RPL11AYPR102C 525 nt2.82□□□□□ -1.96
SSN8P47821 AIM4YBR194W 372 nt2.82□□□□□ -1.96
SSN8P47821 ANR2YKL047W 1551 nt2.82□□□□□ -1.96
SSN8P47821 LRG1YDL240W 3054 nt2.82□□□□□ -1.96
SSN8P47821 MUS81YDR386W 1899 nt2.82□□□□□ -1.96
SSN8P47821 21S_rRNA21S_rRNA 3296 nt2.81□□□□□ -1.96
SSN8P47821 DAD1YDR016C 285 nt2.81□□□□□ -1.96
SSN8P47821 YDR018CYDR018C 1191 nt2.81□□□□□ -1.96
SSN8P47821 NSA2YER126C 786 nt2.81□□□□□ -1.96
SSN8P47821 RPB9YGL070C 369 nt2.81□□□□□ -1.96
SSN8P47821 PCL5YHR071W 690 nt2.81□□□□□ -1.96
SSN8P47821 RPL15AYLR029C 615 nt2.81□□□□□ -1.96
SSN8P47821 ENV10YLR065C 546 nt2.81□□□□□ -1.96
SSN8P47821 GOT1YMR292W 417 nt2.81□□□□□ -1.96
SSN8P47821 LCL1YPL056C 306 nt2.81□□□□□ -1.96
SSN8P47821 AFT2YPL202C 1251 nt2.81□□□□□ -1.96
SSN8P47821 YPR172WYPR172W 603 nt2.81□□□□□ -1.96
SSN8P47821 MFB1YDR219C 1398 nt2.81□□□□□ -1.96
SSN8P47821 MRS2YOR334W 1413 nt2.81□□□□□ -1.96
SSN8P47821 EXO5YBR163W 1758 nt2.81□□□□□ -1.96
SSN8P47821 MNT3YIL014W 1893 nt2.81□□□□□ -1.96
SSN8P47821 GYL1YMR192W 2163 nt2.81□□□□□ -1.96
SSN8P47821 SPO14YKR031C 5052 nt2.81□□□□□ -1.96
SSN8P47821 TOM1YDR457W 9807 nt2.8□□□□□ -1.96
SSN8P47821 YHR080CYHR080C 4038 nt2.8□□□□□ -1.96
SSN8P47821 AKR1YDR264C 2295 nt2.8□□□□□ -1.96
SSN8P47821 DNM1YLL001W 2274 nt2.8□□□□□ -1.96
SSN8P47821 SHQ1YIL104C 1524 nt2.8□□□□□ -1.96
SSN8P47821 AVT5YBL089W 1380 nt2.8□□□□□ -1.96
SSN8P47821 RPS14AYCR031C 414 nt2.8□□□□□ -1.96
SSN8P47821 DTD1YDL219W 453 nt2.8□□□□□ -1.96
SSN8P47821 RSM24YDR175C 960 nt2.8□□□□□ -1.96
SSN8P47821 EMI1YDR512C 564 nt2.8□□□□□ -1.96
SSN8P47821 NTF2YER009W 378 nt2.8□□□□□ -1.96
SSN8P47821 YGR293CYGR293C 462 nt2.8□□□□□ -1.96
SSN8P47821 YLR202CYLR202C 327 nt2.8□□□□□ -1.96
SSN8P47821 ARF3YOR094W 552 nt2.8□□□□□ -1.96
SSN8P47821 YBR051WYBR051W 351 nt2.8□□□□□ -1.96
SSN8P47821 YPL107WYPL107W 747 nt2.8□□□□□ -1.96
SSN8P47821 ITC1YGL133W 3795 nt2.8□□□□□ -1.96
SSN8P47821 FLO5YHR211W 3228 nt2.8□□□□□ -1.96
SSN8P47821 YCG1YDR325W 3108 nt2.8□□□□□ -1.96
SSN8P47821 ATG13YPR185W 2217 nt2.8□□□□□ -1.96
SSN8P47821 SPP382YLR424W 2127 nt2.8□□□□□ -1.96
SSN8P47821 VAS1YGR094W 3315 nt2.8□□□□□ -1.96
SSN8P47821 CIK1YMR198W 1785 nt2.79□□□□□ -1.96
SSN8P47821 SEC7YDR170C 6030 nt2.79□□□□□ -1.96
SSN8P47821 HFD1YMR110C 1599 nt2.79□□□□□ -1.96
SSN8P47821 SLK19YOR195W 2466 nt2.79□□□□□ -1.96
SSN8P47821 YDR115WYDR115W 318 nt2.79□□□□□ -1.96
SSN8P47821 SUP56tL(CAA)A 82 nt2.79□□□□□ -1.96
SSN8P47821 SUP53tL(CAA)C 82 nt2.79□□□□□ -1.96
SSN8P47821 tL(CAA)DtL(CAA)D 82 nt2.79□□□□□ -1.96
SSN8P47821 tL(CAA)G1tL(CAA)G1 82 nt2.79□□□□□ -1.96
SSN8P47821 SUP54tL(CAA)G2 82 nt2.79□□□□□ -1.96
SSN8P47821 tL(CAA)G3tL(CAA)G3 82 nt2.79□□□□□ -1.96
SSN8P47821 tL(CAA)KtL(CAA)K 82 nt2.79□□□□□ -1.96
SSN8P47821 CDC26YFR036W 375 nt2.79□□□□□ -1.96
SSN8P47821 tL(CAA)LtL(CAA)L 82 nt2.79□□□□□ -1.96
SSN8P47821 tL(CAA)MtL(CAA)M 82 nt2.79□□□□□ -1.96
SSN8P47821 tL(CAA)NtL(CAA)N 82 nt2.79□□□□□ -1.96
SSN8P47821 IST3YIR005W 447 nt2.79□□□□□ -1.96
SSN8P47821 RPL17BYJL177W 555 nt2.79□□□□□ -1.96
SSN8P47821 STE18YJR086W 333 nt2.79□□□□□ -1.96
SSN8P47821 YMR122W-AYMR122W-A 255 nt2.79□□□□□ -1.96
SSN8P47821 IMP4YNL075W 873 nt2.79□□□□□ -1.96
SSN8P47821 MSN1YOL116W 1149 nt2.79□□□□□ -1.96
SSN8P47821 NTC20YBR188C 423 nt2.79□□□□□ -1.96
SSN8P47821 ASI3YNL008C 2031 nt2.79□□□□□ -1.96
SSN8P47821 YNR063WYNR063W 1824 nt2.79□□□□□ -1.96
SSN8P47821 15S_rRNA15S_rRNA 1649 nt2.79□□□□□ -1.96
SSN8P47821 MPS1YDL028C 2295 nt2.79□□□□□ -1.96
SSN8P47821 NSA1YGL111W 1392 nt2.78□□□□□ -1.96
SSN8P47821 VHR1YIL056W 1923 nt2.78□□□□□ -1.96
SSN8P47821 SYO1YDL063C 1863 nt2.78□□□□□ -1.96
SSN8P47821 TOM70YNL121C 1854 nt2.78□□□□□ -1.96
SSN8P47821 snR9snR9 187 nt2.78□□□□□ -1.96
SSN8P47821 NCB2YDR397C 441 nt2.78□□□□□ -1.96
SSN8P47821 YDR461C-AYDR461C-A 243 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms