Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 GUP1YGL084C 1683 nt1.45□□□□□ -2.18
VPS55P47111 ROY1YMR258C 1662 nt1.45□□□□□ -2.18
VPS55P47111 STD1YOR047C 1335 nt1.45□□□□□ -2.18
VPS55P47111 FIG2YCR089W 4830 nt1.45□□□□□ -2.18
VPS55P47111 HUL5YGL141W 2733 nt1.45□□□□□ -2.18
VPS55P47111 YBR259WYBR259W 2067 nt1.45□□□□□ -2.18
VPS55P47111 RRP42YDL111C 798 nt1.45□□□□□ -2.18
VPS55P47111 HMO1YDR174W 741 nt1.45□□□□□ -2.18
VPS55P47111 YDR537CYDR537C 606 nt1.45□□□□□ -2.18
VPS55P47111 YER068C-AYER068C-A 432 nt1.45□□□□□ -2.18
VPS55P47111 YGR050CYGR050C 357 nt1.45□□□□□ -2.18
VPS55P47111 CAB2YIL083C 1098 nt1.45□□□□□ -2.18
VPS55P47111 YMR320WYMR320W 306 nt1.45□□□□□ -2.18
VPS55P47111 YNL144W-AYNL144W-A 84 nt1.45□□□□□ -2.18
VPS55P47111 AGE1YDR524C 1449 nt1.45□□□□□ -2.18
VPS55P47111 PST1YDR055W 1335 nt1.44□□□□□ -2.18
VPS55P47111 TIM11YDR322C-A 291 nt1.44□□□□□ -2.18
VPS55P47111 PMI40YER003C 1290 nt1.44□□□□□ -2.18
VPS55P47111 YFR032C-BYFR032C-B 264 nt1.44□□□□□ -2.18
VPS55P47111 YGL101WYGL101W 648 nt1.44□□□□□ -2.18
VPS55P47111 YGR149WYGR149W 1299 nt1.44□□□□□ -2.18
VPS55P47111 YGR168CYGR168C 1131 nt1.44□□□□□ -2.18
VPS55P47111 TFA2YKR062W 987 nt1.44□□□□□ -2.18
VPS55P47111 YBL028CYBL028C 321 nt1.44□□□□□ -2.18
VPS55P47111 UAF30YOR295W 687 nt1.44□□□□□ -2.18
VPS55P47111 SLM4YBR077C 489 nt1.44□□□□□ -2.18
VPS55P47111 YPR097WYPR097W 3222 nt1.44□□□□□ -2.18
VPS55P47111 MPS1YDL028C 2295 nt1.43□□□□□ -2.18
VPS55P47111 VPS34YLR240W 2628 nt1.43□□□□□ -2.18
VPS55P47111 SPO77YLR341W 1434 nt1.43□□□□□ -2.18
VPS55P47111 RGL1YPL066W 1440 nt1.43□□□□□ -2.18
VPS55P47111 SEN54YPL083C 1404 nt1.43□□□□□ -2.18
VPS55P47111 YEL075CYEL075C 369 nt1.43□□□□□ -2.18
VPS55P47111 SPO12YHR152W 522 nt1.43□□□□□ -2.18
VPS55P47111 SNX4YJL036W 1272 nt1.43□□□□□ -2.18
VPS55P47111 UTP30YKR060W 825 nt1.43□□□□□ -2.18
VPS55P47111 GIP3YPL137C 3831 nt1.43□□□□□ -2.18
VPS55P47111 VPS15YBR097W 4365 nt1.43□□□□□ -2.18
VPS55P47111 YFL041W-AYFL041W-A 192 nt1.42□□□□□ -2.18
VPS55P47111 LSM12YHR121W 564 nt1.42□□□□□ -2.18
VPS55P47111 MRPL6YHR147C 645 nt1.42□□□□□ -2.18
VPS55P47111 YKL162CYKL162C 1209 nt1.42□□□□□ -2.18
VPS55P47111 SRL3YKR091W 741 nt1.42□□□□□ -2.18
VPS55P47111 YIM2YMR151W 438 nt1.42□□□□□ -2.18
VPS55P47111 YMR247W-AYMR247W-A 144 nt1.42□□□□□ -2.18
VPS55P47111 PDR17YNL264C 1053 nt1.42□□□□□ -2.18
VPS55P47111 TPT1YOL102C 693 nt1.42□□□□□ -2.18
VPS55P47111 YPL035CYPL035C 348 nt1.42□□□□□ -2.18
VPS55P47111 LHS1YKL073W 2646 nt1.42□□□□□ -2.18
VPS55P47111 YDL241WYDL241W 372 nt1.41□□□□□ -2.18
VPS55P47111 LRS4YDR439W 1044 nt1.41□□□□□ -2.18
VPS55P47111 tT(UGU)HtT(UGU)H 72 nt1.41□□□□□ -2.18
VPS55P47111 YHR210CYHR210C 1026 nt1.41□□□□□ -2.18
VPS55P47111 IGO1YNL157W 507 nt1.41□□□□□ -2.18
VPS55P47111 RPC40YPR110C 1008 nt1.41□□□□□ -2.18
VPS55P47111 TRM12YML005W 1389 nt1.41□□□□□ -2.18
VPS55P47111 STN1YDR082W 1485 nt1.41□□□□□ -2.18
VPS55P47111 CST9YLR394W 1449 nt1.4□□□□□ -2.18
VPS55P47111 ECM5YMR176W 4236 nt1.4□□□□□ -2.18
VPS55P47111 PEP1YBL017C 4740 nt1.4□□□□□ -2.18
VPS55P47111 SIR4YDR227W 4077 nt1.4□□□□□ -2.19
VPS55P47111 YLR108CYLR108C 1458 nt1.4□□□□□ -2.19
VPS55P47111 MIG2YGL209W 1149 nt1.4□□□□□ -2.19
VPS55P47111 NOP19YGR251W 591 nt1.4□□□□□ -2.19
VPS55P47111 YIL068W-AYIL068W-A 384 nt1.4□□□□□ -2.19
VPS55P47111 MET14YKL001C 609 nt1.4□□□□□ -2.19
VPS55P47111 YKR051WYKR051W 1257 nt1.4□□□□□ -2.19
VPS55P47111 PAU8YAL068C 363 nt1.4□□□□□ -2.19
VPS55P47111 YLR154W-AYLR154W-A 186 nt1.4□□□□□ -2.19
VPS55P47111 YLR363W-AYLR363W-A 258 nt1.4□□□□□ -2.19
VPS55P47111 YMR306C-AYMR306C-A 390 nt1.4□□□□□ -2.19
VPS55P47111 MRPL17YNL252C 846 nt1.4□□□□□ -2.19
VPS55P47111 PAU20YOL161C 363 nt1.4□□□□□ -2.19
VPS55P47111 MSS4YDR208W 2340 nt1.4□□□□□ -2.19
VPS55P47111 YOR365CYOR365C 2112 nt1.4□□□□□ -2.19
VPS55P47111 STI1YOR027W 1770 nt1.39□□□□□ -2.19
VPS55P47111 HAP4YKL109W 1665 nt1.39□□□□□ -2.19
VPS55P47111 YML096WYML096W 1578 nt1.39□□□□□ -2.19
VPS55P47111 YGR226CYGR226C 210 nt1.39□□□□□ -2.19
VPS55P47111 EPT1YHR123W 1176 nt1.39□□□□□ -2.19
VPS55P47111 YKL071WYKL071W 771 nt1.39□□□□□ -2.19
VPS55P47111 SUR1YPL057C 1149 nt1.39□□□□□ -2.19
VPS55P47111 YSA1YBR111C 696 nt1.39□□□□□ -2.19
VPS55P47111 ATP22YDR350C 2055 nt1.39□□□□□ -2.19
VPS55P47111 NPR3YHL023C 3441 nt1.39□□□□□ -2.19
VPS55P47111 YLR422WYLR422W 5799 nt1.38□□□□□ -2.19
VPS55P47111 RRP1YDR087C 837 nt1.38□□□□□ -2.19
VPS55P47111 RAV2YDR202C 1056 nt1.38□□□□□ -2.19
VPS55P47111 GPI8YDR331W 1236 nt1.38□□□□□ -2.19
VPS55P47111 YDR355CYDR355C 303 nt1.38□□□□□ -2.19
VPS55P47111 IZH1YDR492W 951 nt1.38□□□□□ -2.19
VPS55P47111 OMA1YKR087C 1038 nt1.38□□□□□ -2.19
VPS55P47111 SPC3YLR066W 555 nt1.38□□□□□ -2.19
VPS55P47111 LIP2YLR239C 987 nt1.38□□□□□ -2.19
VPS55P47111 YNL035CYNL035C 1170 nt1.38□□□□□ -2.19
VPS55P47111 YOL114CYOL114C 609 nt1.38□□□□□ -2.19
VPS55P47111 FYV12YOR183W 390 nt1.38□□□□□ -2.19
VPS55P47111 MPD1YOR288C 957 nt1.38□□□□□ -2.19
VPS55P47111 YPR078CYPR078C 1119 nt1.38□□□□□ -2.19
VPS55P47111 YBR197CYBR197C 654 nt1.38□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms