Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	PPZ1	YML016C	2079 nt		3.73	□□□□□ -1.81
CAF16	P43569	HAA1	YPR008W	2085 nt		3.73	□□□□□ -1.81
CAF16	P43569	PPN1	YDR452W	2025 nt		3.73	□□□□□ -1.81
CAF16	P43569	SRB4	YER022W	2064 nt		3.72	□□□□□ -1.81
CAF16	P43569	TOP1	YOL006C	2310 nt		3.72	□□□□□ -1.81
CAF16	P43569	SRP72	YPL210C	1923 nt		3.72	□□□□□ -1.81
CAF16	P43569	YDR442W	YDR442W	393 nt		3.72	□□□□□ -1.81
CAF16	P43569	RTS3	YGR161C	792 nt		3.72	□□□□□ -1.81
CAF16	P43569	BIG1	YHR101C	1008 nt		3.72	□□□□□ -1.81
CAF16	P43569	CMS1	YLR003C	876 nt		3.72	□□□□□ -1.81
CAF16	P43569	HRI1	YLR301W	735 nt		3.72	□□□□□ -1.81
CAF16	P43569	snR54	snR54	86 nt		3.72	□□□□□ -1.81
CAF16	P43569	MUS81	YDR386W	1899 nt		3.72	□□□□□ -1.81
CAF16	P43569	CBP2	YHL038C	1893 nt		3.72	□□□□□ -1.81
CAF16	P43569	ABP140	YOR239W	1887 nt		3.72	□□□□□ -1.81
CAF16	P43569	PAM1	YDR251W	2493 nt		3.72	□□□□□ -1.81
CAF16	P43569	ACE2	YLR131C	2313 nt		3.72	□□□□□ -1.81
CAF16	P43569	YEL1	YBL060W	2064 nt		3.72	□□□□□ -1.81
CAF16	P43569	MAL33	YBR297W	1407 nt		3.71	□□□□□ -1.82
CAF16	P43569	COA3	YJL062W-A	258 nt		3.71	□□□□□ -1.82
CAF16	P43569	YAL031W-A	YAL031W-A	309 nt		3.71	□□□□□ -1.82
CAF16	P43569	VPH2	YKL119C	648 nt		3.71	□□□□□ -1.82
CAF16	P43569	YML108W	YML108W	318 nt		3.71	□□□□□ -1.82
CAF16	P43569	RPL19A	YBR084C-A	570 nt		3.71	□□□□□ -1.82
CAF16	P43569	YGL140C	YGL140C	3660 nt		3.71	□□□□□ -1.82
CAF16	P43569	KRE5	YOR336W	4098 nt		3.7	□□□□□ -1.82
CAF16	P43569	CIN1	YOR349W	3045 nt		3.7	□□□□□ -1.82
CAF16	P43569	RTR2	YDR066C	591 nt		3.7	□□□□□ -1.82
CAF16	P43569	ECO1	YFR027W	846 nt		3.7	□□□□□ -1.82
CAF16	P43569	YGR242W	YGR242W	309 nt		3.7	□□□□□ -1.82
CAF16	P43569	DFG10	YIL049W	762 nt		3.7	□□□□□ -1.82
CAF16	P43569	YJL169W	YJL169W	369 nt		3.7	□□□□□ -1.82
CAF16	P43569	MRP49	YKL167C	414 nt		3.7	□□□□□ -1.82
CAF16	P43569	PDS5	YMR076C	3834 nt		3.7	□□□□□ -1.82
CAF16	P43569	YNL296W	YNL296W	315 nt		3.7	□□□□□ -1.82
CAF16	P43569	ARR2	YPR200C	393 nt		3.7	□□□□□ -1.82
CAF16	P43569	MLH2	YLR035C	2088 nt		3.7	□□□□□ -1.82
CAF16	P43569	PSY4	YBL046W	1326 nt		3.7	□□□□□ -1.82
CAF16	P43569	BIK1	YCL029C	1323 nt		3.7	□□□□□ -1.82
CAF16	P43569	YPR003C	YPR003C	2265 nt		3.69	□□□□□ -1.82
CAF16	P43569	SEC15	YGL233W	2733 nt		3.69	□□□□□ -1.82
CAF16	P43569	RUD3	YOR216C	1455 nt		3.69	□□□□□ -1.82
CAF16	P43569	SSF2	YDR312W	1362 nt		3.69	□□□□□ -1.82
CAF16	P43569	GDI1	YER136W	1356 nt		3.69	□□□□□ -1.82
CAF16	P43569	BCD1	YHR040W	1101 nt		3.69	□□□□□ -1.82
CAF16	P43569	YIL175W	YIL175W	318 nt		3.69	□□□□□ -1.82
CAF16	P43569	YLR101C	YLR101C	396 nt		3.69	□□□□□ -1.82
CAF16	P43569	VID24	YBR105C	1089 nt		3.69	□□□□□ -1.82
CAF16	P43569	CEP3	YMR168C	1827 nt		3.68	□□□□□ -1.82
CAF16	P43569	YDR269C	YDR269C	324 nt		3.68	□□□□□ -1.82
CAF16	P43569	ERV1	YGR029W	570 nt		3.68	□□□□□ -1.82
CAF16	P43569	tX(XXX)D	tX(XXX)D	100 nt		3.68	□□□□□ -1.82
CAF16	P43569	HIS5	YIL116W	1158 nt		3.68	□□□□□ -1.82
CAF16	P43569	YKL068W-A	YKL068W-A	237 nt		3.68	□□□□□ -1.82
CAF16	P43569	ASC1	YMR116C	960 nt		3.68	□□□□□ -1.82
CAF16	P43569	ECM16	YMR128W	3804 nt		3.68	□□□□□ -1.82
CAF16	P43569	YOR029W	YOR029W	336 nt		3.68	□□□□□ -1.82
CAF16	P43569	FSH3	YOR280C	801 nt		3.68	□□□□□ -1.82
CAF16	P43569	XRN1	YGL173C	4587 nt		3.68	□□□□□ -1.82
CAF16	P43569	YKL222C	YKL222C	2118 nt		3.68	□□□□□ -1.82
CAF16	P43569	RPO31	YOR116C	4383 nt		3.68	□□□□□ -1.82
CAF16	P43569	SSP1	YHR184W	1716 nt		3.67	□□□□□ -1.82
CAF16	P43569	BRE4	YDL231C	3378 nt		3.67	□□□□□ -1.82
CAF16	P43569	FAS1	YKL182W	6156 nt		3.67	□□□□□ -1.82
CAF16	P43569	RPS14A	YCR031C	414 nt		3.67	□□□□□ -1.82
CAF16	P43569	YCR090C	YCR090C	549 nt		3.67	□□□□□ -1.82
CAF16	P43569	YER006C-A	YER006C-A	318 nt		3.67	□□□□□ -1.82
CAF16	P43569	YER079W	YER079W	633 nt		3.67	□□□□□ -1.82
CAF16	P43569	YER091C-A	YER091C-A	222 nt		3.67	□□□□□ -1.82
CAF16	P43569	YHR125W	YHR125W	306 nt		3.67	□□□□□ -1.82
CAF16	P43569	SPC1	YJR010C-A	285 nt		3.67	□□□□□ -1.82
CAF16	P43569	ARV1	YLR242C	966 nt		3.67	□□□□□ -1.82
CAF16	P43569	TIF11	YMR260C	462 nt		3.67	□□□□□ -1.82
CAF16	P43569	YNL146C-A	YNL146C-A	195 nt		3.67	□□□□□ -1.82
CAF16	P43569	YOR248W	YOR248W	303 nt		3.67	□□□□□ -1.82
CAF16	P43569	PBS2	YJL128C	2007 nt		3.66	□□□□□ -1.82
CAF16	P43569	KRI1	YNL308C	1776 nt		3.66	□□□□□ -1.82
CAF16	P43569	PHM6	YDR281C	315 nt		3.66	□□□□□ -1.82
CAF16	P43569	RTR1	YER139C	681 nt		3.66	□□□□□ -1.82
CAF16	P43569	RPS0A	YGR214W	759 nt		3.66	□□□□□ -1.82
CAF16	P43569	RRT16	YNL105W	429 nt		3.66	□□□□□ -1.82
CAF16	P43569	NOP15	YNL110C	663 nt		3.66	□□□□□ -1.82
CAF16	P43569	YNR042W	YNR042W	429 nt		3.66	□□□□□ -1.82
CAF16	P43569	YOL085W-A	YOL085W-A	213 nt		3.66	□□□□□ -1.82
CAF16	P43569	YOL159C	YOL159C	516 nt		3.66	□□□□□ -1.82
CAF16	P43569	SWH1	YAR042W	3567 nt		3.66	□□□□□ -1.82
CAF16	P43569	CDC55	YGL190C	1581 nt		3.66	□□□□□ -1.82
CAF16	P43569	JJJ2	YJL162C	1752 nt		3.66	□□□□□ -1.82
CAF16	P43569	MCM7	YBR202W	2538 nt		3.65	□□□□□ -1.83
CAF16	P43569	YDR246W-A	YDR246W-A	201 nt		3.65	□□□□□ -1.83
CAF16	P43569	JAC1	YGL018C	555 nt		3.65	□□□□□ -1.83
CAF16	P43569	YGL042C	YGL042C	306 nt		3.65	□□□□□ -1.83
CAF16	P43569	OTU2	YHL013C	924 nt		3.65	□□□□□ -1.83
CAF16	P43569	YAR047C	YAR047C	321 nt		3.65	□□□□□ -1.83
CAF16	P43569	CDC123	YLR215C	1083 nt		3.65	□□□□□ -1.83
CAF16	P43569	RSM19	YNR037C	276 nt		3.65	□□□□□ -1.83
CAF16	P43569	OST2	YOR103C	393 nt		3.65	□□□□□ -1.83
CAF16	P43569	YOR293C-A	YOR293C-A	150 nt		3.65	□□□□□ -1.83
CAF16	P43569	MSS18	YPR134W	807 nt		3.65	□□□□□ -1.83
CAF16	P43569	RNR1	YER070W	2667 nt		3.65	□□□□□ -1.83

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