Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC1A3P43003 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC1A3P43003 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC1A3P43003 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC1A3P43003 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLC1A3P43003 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.13■□□□□ 0.65
SLC1A3P43003 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC1A3P43003 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC1A3P43003 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC1A3P43003 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC1A3P43003 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC1A3P43003 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC1A3P43003 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A3P43003 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC1A3P43003 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC1A3P43003 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC1A3P43003 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SLC1A3P43003 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.12■□□□□ 0.65
SLC1A3P43003 TERF1P2-201ENST00000583350 1212 ntBASIC19.12■□□□□ 0.65
SLC1A3P43003 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC1A3P43003 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A3P43003 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC1A3P43003 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC1A3P43003 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC1A3P43003 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A3P43003 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SLC1A3P43003 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC1A3P43003 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC1A3P43003 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC1A3P43003 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SLC1A3P43003 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC1A3P43003 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC1A3P43003 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A3P43003 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC1A3P43003 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC1A3P43003 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A3P43003 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC1A3P43003 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC1A3P43003 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC1A3P43003 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC1A3P43003 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC1A3P43003 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC1A3P43003 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC1A3P43003 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC1A3P43003 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC1A3P43003 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A3P43003 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A3P43003 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A3P43003 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A3P43003 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A3P43003 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC1A3P43003 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms