Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 MMF1YIL051C 438 nt2.57□□□□□ -2
RTR1P40084 MCR1YKL150W 909 nt2.57□□□□□ -2
RTR1P40084 NNT1YLR285W 786 nt2.57□□□□□ -2
RTR1P40084 MCT1YOR221C 1083 nt2.57□□□□□ -2
RTR1P40084 KHA1YJL094C 2622 nt2.57□□□□□ -2
RTR1P40084 URB2YJR041C 3525 nt2.57□□□□□ -2
RTR1P40084 YDR239CYDR239C 2364 nt2.57□□□□□ -2
RTR1P40084 PSK2YOL045W 3306 nt2.57□□□□□ -2
RTR1P40084 DDI2YFL061W 678 nt2.56□□□□□ -2
RTR1P40084 YGL006W-AYGL006W-A 111 nt2.56□□□□□ -2
RTR1P40084 RPS25AYGR027C 327 nt2.56□□□□□ -2
RTR1P40084 RGI2YIL057C 495 nt2.56□□□□□ -2
RTR1P40084 RPA12YJR063W 378 nt2.56□□□□□ -2
RTR1P40084 SIC1YLR079W 855 nt2.56□□□□□ -2
RTR1P40084 HMT1YBR034C 1047 nt2.56□□□□□ -2
RTR1P40084 NPR3YHL023C 3441 nt2.56□□□□□ -2
RTR1P40084 POL4YCR014C 1749 nt2.56□□□□□ -2
RTR1P40084 MED2YDL005C 1296 nt2.55□□□□□ -2
RTR1P40084 GIS1YDR096W 2685 nt2.55□□□□□ -2
RTR1P40084 TIF35YDR429C 825 nt2.55□□□□□ -2
RTR1P40084 FIP1YJR093C 984 nt2.55□□□□□ -2
RTR1P40084 OMA1YKR087C 1038 nt2.55□□□□□ -2
RTR1P40084 BET5YML077W 480 nt2.55□□□□□ -2
RTR1P40084 YKU80YMR106C 1890 nt2.55□□□□□ -2
RTR1P40084 YPL142CYPL142C 318 nt2.55□□□□□ -2
RTR1P40084 SMY2YBR172C 2223 nt2.55□□□□□ -2
RTR1P40084 YBR201C-AYBR201C-A 204 nt2.55□□□□□ -2
RTR1P40084 MGM1YOR211C 2646 nt2.55□□□□□ -2
RTR1P40084 GDI1YER136W 1356 nt2.54□□□□□ -2
RTR1P40084 YDL186WYDL186W 834 nt2.54□□□□□ -2
RTR1P40084 YGR168CYGR168C 1131 nt2.54□□□□□ -2
RTR1P40084 SAY1YGR263C 1275 nt2.54□□□□□ -2
RTR1P40084 AIM19YIL087C 474 nt2.54□□□□□ -2
RTR1P40084 PSY3YLR376C 729 nt2.54□□□□□ -2
RTR1P40084 YOR203WYOR203W 354 nt2.54□□□□□ -2
RTR1P40084 GCV2YMR189W 3105 nt2.54□□□□□ -2
RTR1P40084 SLY41YOR307C 1362 nt2.53□□□□□ -2
RTR1P40084 BNI1YNL271C 5862 nt2.53□□□□□ -2
RTR1P40084 FMN1YDR236C 657 nt2.53□□□□□ -2
RTR1P40084 ERV1YGR029W 570 nt2.53□□□□□ -2
RTR1P40084 YLR365WYLR365W 333 nt2.53□□□□□ -2
RTR1P40084 SPC24YMR117C 642 nt2.53□□□□□ -2
RTR1P40084 MUM2YBR057C 1101 nt2.53□□□□□ -2
RTR1P40084 ACM1YPL267W 630 nt2.53□□□□□ -2
RTR1P40084 PIS1YPR113W 663 nt2.53□□□□□ -2
RTR1P40084 DPB3YBR278W 606 nt2.53□□□□□ -2
RTR1P40084 PEX5YDR244W 1839 nt2.52□□□□□ -2.01
RTR1P40084 YER172C-AYER172C-A 381 nt2.52□□□□□ -2.01
RTR1P40084 YJL169WYJL169W 369 nt2.52□□□□□ -2.01
RTR1P40084 SRL1YOR247W 633 nt2.52□□□□□ -2.01
RTR1P40084 SEC66YBR171W 621 nt2.52□□□□□ -2.01
RTR1P40084 CTP1YBR291C 900 nt2.52□□□□□ -2.01
RTR1P40084 SPP41YDR464W 4308 nt2.51□□□□□ -2.01
RTR1P40084 YNL193WYNL193W 1677 nt2.51□□□□□ -2.01
RTR1P40084 ADH4YGL256W 1149 nt2.51□□□□□ -2.01
RTR1P40084 RSR1YGR152C 819 nt2.51□□□□□ -2.01
RTR1P40084 PML39YML107C 1005 nt2.51□□□□□ -2.01
RTR1P40084 BTS1YPL069C 1008 nt2.51□□□□□ -2.01
RTR1P40084 ATG5YPL149W 885 nt2.51□□□□□ -2.01
RTR1P40084 ORC2YBR060C 1863 nt2.51□□□□□ -2.01
RTR1P40084 SGM1YJR134C 2124 nt2.5□□□□□ -2.01
RTR1P40084 ICR1ICR1 3199 nt2.5□□□□□ -2.01
RTR1P40084 ANR2YKL047W 1551 nt2.5□□□□□ -2.01
RTR1P40084 NFT1YKR103W 3657 nt2.5□□□□□ -2.01
RTR1P40084 FAR11YNL127W 2862 nt2.5□□□□□ -2.01
RTR1P40084 YDL241WYDL241W 372 nt2.5□□□□□ -2.01
RTR1P40084 TIM11YDR322C-A 291 nt2.5□□□□□ -2.01
RTR1P40084 COBQ0105 1158 nt2.5□□□□□ -2.01
RTR1P40084 RPS29AYLR388W 171 nt2.5□□□□□ -2.01
RTR1P40084 RPS1AYLR441C 768 nt2.5□□□□□ -2.01
RTR1P40084 POP8YBL018C 402 nt2.5□□□□□ -2.01
RTR1P40084 PRM6YML047C 1059 nt2.5□□□□□ -2.01
RTR1P40084 COQ10YOL008W 624 nt2.5□□□□□ -2.01
RTR1P40084 YOR114WYOR114W 885 nt2.5□□□□□ -2.01
RTR1P40084 HAT1YPL001W 1125 nt2.5□□□□□ -2.01
RTR1P40084 AIM4YBR194W 372 nt2.5□□□□□ -2.01
RTR1P40084 YBT1YLL048C 4986 nt2.5□□□□□ -2.01
RTR1P40084 PSD2YGR170W 3417 nt2.5□□□□□ -2.01
RTR1P40084 SCH9YHR205W 2475 nt2.49□□□□□ -2.01
RTR1P40084 RAV1YJR033C 4074 nt2.49□□□□□ -2.01
RTR1P40084 SFT1YKL006C-A 294 nt2.49□□□□□ -2.01
RTR1P40084 MSA2YKR077W 1092 nt2.49□□□□□ -2.01
RTR1P40084 MPP6YNR024W 561 nt2.49□□□□□ -2.01
RTR1P40084 YOL134CYOL134C 390 nt2.49□□□□□ -2.01
RTR1P40084 DAD3YBR233W-A 285 nt2.49□□□□□ -2.01
RTR1P40084 SEC31YDL195W 3822 nt2.49□□□□□ -2.01
RTR1P40084 ERT1YBR239C 1590 nt2.49□□□□□ -2.01
RTR1P40084 TPS2YDR074W 2691 nt2.48□□□□□ -2.01
RTR1P40084 GAL80YML051W 1308 nt2.48□□□□□ -2.01
RTR1P40084 TCA17YEL048C 459 nt2.48□□□□□ -2.01
RTR1P40084 STE2YFL026W 1296 nt2.48□□□□□ -2.01
RTR1P40084 UPF3YGR072W 1164 nt2.48□□□□□ -2.01
RTR1P40084 OTU2YHL013C 924 nt2.48□□□□□ -2.01
RTR1P40084 NNF1YJR112W 606 nt2.48□□□□□ -2.01
RTR1P40084 SRL3YKR091W 741 nt2.48□□□□□ -2.01
RTR1P40084 CWC24YLR323C 780 nt2.48□□□□□ -2.01
RTR1P40084 TFB1YDR311W 1929 nt2.48□□□□□ -2.01
RTR1P40084 KRE33YNL132W 3171 nt2.47□□□□□ -2.01
RTR1P40084 EDS1YBR033W 2760 nt2.47□□□□□ -2.01
RTR1P40084 HYP2YEL034W 474 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 10 ms