Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 OXCT2P1-201ENST00000447263 1535 ntBASIC23.64■■□□□ 1.37
CLCN1P35523 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.64■■□□□ 1.37
CLCN1P35523 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN1P35523 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN1P35523 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.63■■□□□ 1.37
CLCN1P35523 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.63■■□□□ 1.37
CLCN1P35523 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.63■■□□□ 1.37
CLCN1P35523 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.63■■□□□ 1.37
CLCN1P35523 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN1P35523 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN1P35523 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.63■■□□□ 1.37
CLCN1P35523 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN1P35523 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN1P35523 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.63■■□□□ 1.37
CLCN1P35523 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN1P35523 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.63■■□□□ 1.37
CLCN1P35523 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 AC116562.4-201ENST00000641316 2276 ntBASIC23.62■■□□□ 1.37
CLCN1P35523 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 AL499627.2-201ENST00000606283 725 ntBASIC23.62■■□□□ 1.37
CLCN1P35523 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CLCN1P35523 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.62■■□□□ 1.37
CLCN1P35523 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
CLCN1P35523 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 AC004687.1-201ENST00000579003 1625 ntBASIC23.62■■□□□ 1.37
CLCN1P35523 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CLCN1P35523 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN1P35523 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.61■■□□□ 1.37
CLCN1P35523 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.61■■□□□ 1.37
CLCN1P35523 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.61■■□□□ 1.37
CLCN1P35523 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.61■■□□□ 1.37
CLCN1P35523 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.61■■□□□ 1.37
CLCN1P35523 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN1P35523 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CLCN1P35523 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.6■■□□□ 1.37
CLCN1P35523 AC006455.2-201ENST00000429931 906 ntBASIC23.6■■□□□ 1.37
CLCN1P35523 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.6■■□□□ 1.37
CLCN1P35523 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.6■■□□□ 1.37
CLCN1P35523 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
CLCN1P35523 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.6■■□□□ 1.37
CLCN1P35523 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.6■■□□□ 1.37
CLCN1P35523 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CLCN1P35523 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
CLCN1P35523 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN1P35523 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.6■■□□□ 1.37
CLCN1P35523 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN1P35523 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.59■■□□□ 1.37
CLCN1P35523 NEFHP1-201ENST00000412845 2629 ntBASIC23.59■■□□□ 1.37
CLCN1P35523 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN1P35523 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN1P35523 AC241377.3-202ENST00000626088 1088 ntBASIC23.59■■□□□ 1.37
CLCN1P35523 AC241585.3-202ENST00000628937 1088 ntBASIC23.59■■□□□ 1.37
CLCN1P35523 AC245100.8-202ENST00000629247 1058 ntBASIC23.59■■□□□ 1.37
CLCN1P35523 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN1P35523 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.59■■□□□ 1.37
CLCN1P35523 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN1P35523 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CLCN1P35523 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.59■■□□□ 1.37
CLCN1P35523 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN1P35523 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.58■■□□□ 1.37
CLCN1P35523 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.58■■□□□ 1.37
CLCN1P35523 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN1P35523 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN1P35523 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.58■■□□□ 1.37
CLCN1P35523 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN1P35523 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CLCN1P35523 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.58■■□□□ 1.37
CLCN1P35523 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN1P35523 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.58■■□□□ 1.37
CLCN1P35523 AC099791.2-201ENST00000605725 427 ntBASIC23.58■■□□□ 1.37
CLCN1P35523 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN1P35523 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN1P35523 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLCN1P35523 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms