Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RORAP35398 CD99P1-205ENST00000527459 561 ntBASIC19.82■□□□□ 0.76
RORAP35398 AC098934.4-201ENST00000564127 592 ntBASIC19.82■□□□□ 0.76
RORAP35398 AL591742.1-201ENST00000604433 565 ntBASIC19.82■□□□□ 0.76
RORAP35398 AC016405.3-201ENST00000607710 860 ntBASIC19.82■□□□□ 0.76
RORAP35398 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RORAP35398 AC008694.1-202ENST00000636953 945 ntBASIC19.82■□□□□ 0.76
RORAP35398 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.82■□□□□ 0.76
RORAP35398 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.82■□□□□ 0.76
RORAP35398 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RORAP35398 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RORAP35398 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RORAP35398 ABHD17AP1-201ENST00000358206 933 ntBASIC19.81■□□□□ 0.76
RORAP35398 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RORAP35398 MIPEPP3-201ENST00000412105 444 ntBASIC19.81■□□□□ 0.76
RORAP35398 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.81■□□□□ 0.76
RORAP35398 KRT18P6-201ENST00000555540 1265 ntBASIC19.81■□□□□ 0.76
RORAP35398 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.81■□□□□ 0.76
RORAP35398 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RORAP35398 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RORAP35398 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RORAP35398 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RORAP35398 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
RORAP35398 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.8■□□□□ 0.76
RORAP35398 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RORAP35398 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RORAP35398 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.8■□□□□ 0.76
RORAP35398 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.8■□□□□ 0.76
RORAP35398 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.8■□□□□ 0.76
RORAP35398 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.8■□□□□ 0.76
RORAP35398 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.8■□□□□ 0.76
RORAP35398 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
RORAP35398 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.8■□□□□ 0.76
RORAP35398 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
RORAP35398 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RORAP35398 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.8■□□□□ 0.76
RORAP35398 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RORAP35398 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.79■□□□□ 0.76
RORAP35398 MIR4758-201ENST00000577688 71 ntBASIC19.79■□□□□ 0.76
RORAP35398 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.79■□□□□ 0.76
RORAP35398 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RORAP35398 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.79■□□□□ 0.76
RORAP35398 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.79■□□□□ 0.76
RORAP35398 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.79■□□□□ 0.76
RORAP35398 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RORAP35398 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.79■□□□□ 0.76
RORAP35398 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.78■□□□□ 0.76
RORAP35398 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RORAP35398 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
RORAP35398 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RORAP35398 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.78■□□□□ 0.76
RORAP35398 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.78■□□□□ 0.76
RORAP35398 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.78■□□□□ 0.76
RORAP35398 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RORAP35398 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RORAP35398 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.77■□□□□ 0.76
RORAP35398 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RORAP35398 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
RORAP35398 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.77■□□□□ 0.76
RORAP35398 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.77■□□□□ 0.76
RORAP35398 RARRES2P4-201ENST00000514074 484 ntBASIC19.77■□□□□ 0.76
RORAP35398 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.77■□□□□ 0.76
RORAP35398 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.77■□□□□ 0.76
RORAP35398 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.77■□□□□ 0.76
RORAP35398 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.77■□□□□ 0.76
RORAP35398 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RORAP35398 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms