Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YPL107WYPL107W 747 nt3.49□□□□□ -1.85
MSH1P25846 AFT2YPL202C 1251 nt3.49□□□□□ -1.85
MSH1P25846 JID1YPR061C 906 nt3.49□□□□□ -1.85
MSH1P25846 YBR300CYBR300C 498 nt3.49□□□□□ -1.85
MSH1P25846 VPS3YDR495C 3036 nt3.49□□□□□ -1.85
MSH1P25846 YLR278CYLR278C 4026 nt3.49□□□□□ -1.85
MSH1P25846 URB2YJR041C 3525 nt3.48□□□□□ -1.85
MSH1P25846 JEN1YKL217W 1851 nt3.48□□□□□ -1.85
MSH1P25846 MSH2YOL090W 2895 nt3.48□□□□□ -1.85
MSH1P25846 snR5snR5 204 nt3.48□□□□□ -1.85
MSH1P25846 PSF1YDR013W 627 nt3.48□□□□□ -1.85
MSH1P25846 MIC19YFR011C 513 nt3.48□□□□□ -1.85
MSH1P25846 Q0142Q0142 177 nt3.48□□□□□ -1.85
MSH1P25846 PRS3YHL011C 963 nt3.48□□□□□ -1.85
MSH1P25846 YHR214C-DYHR214C-D 294 nt3.48□□□□□ -1.85
MSH1P25846 YJL169WYJL169W 369 nt3.48□□□□□ -1.85
MSH1P25846 STE18YJR086W 333 nt3.48□□□□□ -1.85
MSH1P25846 RLP24YLR009W 600 nt3.48□□□□□ -1.85
MSH1P25846 YAR069CYAR069C 294 nt3.48□□□□□ -1.85
MSH1P25846 YLR456WYLR456W 615 nt3.48□□□□□ -1.85
MSH1P25846 ADI1YMR009W 540 nt3.48□□□□□ -1.85
MSH1P25846 IMP1YMR150C 573 nt3.48□□□□□ -1.85
MSH1P25846 YMR294W-AYMR294W-A 360 nt3.48□□□□□ -1.85
MSH1P25846 YBL065WYBL065W 345 nt3.48□□□□□ -1.85
MSH1P25846 MPP6YNR024W 561 nt3.48□□□□□ -1.85
MSH1P25846 MEI5YPL121C 669 nt3.48□□□□□ -1.85
MSH1P25846 SHS1YDL225W 1656 nt3.48□□□□□ -1.85
MSH1P25846 SMC2YFR031C 3513 nt3.48□□□□□ -1.85
MSH1P25846 snR9snR9 187 nt3.47□□□□□ -1.85
MSH1P25846 VMA8YEL051W 771 nt3.47□□□□□ -1.85
MSH1P25846 PEA2YER149C 1263 nt3.47□□□□□ -1.85
MSH1P25846 MTM1YGR257C 1101 nt3.47□□□□□ -1.85
MSH1P25846 SRL3YKR091W 741 nt3.47□□□□□ -1.85
MSH1P25846 YMR254CYMR254C 309 nt3.47□□□□□ -1.85
MSH1P25846 GOT1YMR292W 417 nt3.47□□□□□ -1.85
MSH1P25846 YNL109WYNL109W 546 nt3.47□□□□□ -1.85
MSH1P25846 YJL132WYJL132W 2253 nt3.46□□□□□ -1.85
MSH1P25846 YGL063C-AYGL063C-A 150 nt3.46□□□□□ -1.86
MSH1P25846 SEC14YMR079W 915 nt3.46□□□□□ -1.86
MSH1P25846 ARF3YOR094W 552 nt3.46□□□□□ -1.86
MSH1P25846 MRPL40YPL173W 894 nt3.46□□□□□ -1.86
MSH1P25846 YBR071WYBR071W 636 nt3.46□□□□□ -1.86
MSH1P25846 STT4YLR305C 5703 nt3.46□□□□□ -1.86
MSH1P25846 BNI4YNL233W 2679 nt3.46□□□□□ -1.86
MSH1P25846 STP2YHR006W 1626 nt3.45□□□□□ -1.86
MSH1P25846 HOP1YIL072W 1818 nt3.45□□□□□ -1.86
MSH1P25846 HMRA1YCR097W 381 nt3.45□□□□□ -1.86
MSH1P25846 AIM26YKL037W 357 nt3.45□□□□□ -1.86
MSH1P25846 YMR187CYMR187C 1296 nt3.45□□□□□ -1.86
MSH1P25846 MSN1YOL116W 1149 nt3.45□□□□□ -1.86
MSH1P25846 YPR177CYPR177C 372 nt3.45□□□□□ -1.86
MSH1P25846 NTC20YBR188C 423 nt3.45□□□□□ -1.86
MSH1P25846 AIM4YBR194W 372 nt3.45□□□□□ -1.86
MSH1P25846 MSH4YFL003C 2637 nt3.45□□□□□ -1.86
MSH1P25846 JJJ1YNL227C 1773 nt3.45□□□□□ -1.86
MSH1P25846 MET10YFR030W 3108 nt3.45□□□□□ -1.86
MSH1P25846 MNT3YIL014W 1893 nt3.45□□□□□ -1.86
MSH1P25846 MYO5YMR109W 3660 nt3.45□□□□□ -1.86
MSH1P25846 YDL180WYDL180W 1644 nt3.44□□□□□ -1.86
MSH1P25846 CWH41YGL027C 2502 nt3.44□□□□□ -1.86
MSH1P25846 NEL1YHR035W 1893 nt3.44□□□□□ -1.86
MSH1P25846 POL2YNL262W 6669 nt3.44□□□□□ -1.86
MSH1P25846 YDR018CYDR018C 1191 nt3.44□□□□□ -1.86
MSH1P25846 YER066C-AYER066C-A 501 nt3.44□□□□□ -1.86
MSH1P25846 TDA2YER071C 381 nt3.44□□□□□ -1.86
MSH1P25846 SDP1YIL113W 630 nt3.44□□□□□ -1.86
MSH1P25846 YJL119CYJL119C 324 nt3.44□□□□□ -1.86
MSH1P25846 YJR141WYJR141W 1044 nt3.44□□□□□ -1.86
MSH1P25846 YLR076CYLR076C 423 nt3.44□□□□□ -1.86
MSH1P25846 YLR222C-AYLR222C-A 231 nt3.44□□□□□ -1.86
MSH1P25846 ATP18YML081C-A 180 nt3.44□□□□□ -1.86
MSH1P25846 RPL20BYOR312C 519 nt3.44□□□□□ -1.86
MSH1P25846 YBR051WYBR051W 351 nt3.44□□□□□ -1.86
MSH1P25846 KHA1YJL094C 2622 nt3.44□□□□□ -1.86
MSH1P25846 15S_rRNA15S_rRNA 1649 nt3.44□□□□□ -1.86
MSH1P25846 SNA4YDL123W 423 nt3.43□□□□□ -1.86
MSH1P25846 YDL242WYDL242W 354 nt3.43□□□□□ -1.86
MSH1P25846 PRE1YER012W 597 nt3.43□□□□□ -1.86
MSH1P25846 YFL019CYFL019C 354 nt3.43□□□□□ -1.86
MSH1P25846 MPO1YGL010W 525 nt3.43□□□□□ -1.86
MSH1P25846 LRP1YHR081W 555 nt3.43□□□□□ -1.86
MSH1P25846 YIR020C-BYIR020C-B 735 nt3.43□□□□□ -1.86
MSH1P25846 YOR032W-AYOR032W-A 201 nt3.43□□□□□ -1.86
MSH1P25846 RPA135YPR010C 3612 nt3.42□□□□□ -1.86
MSH1P25846 EAP1YKL204W 1899 nt3.42□□□□□ -1.86
MSH1P25846 YHR213WYHR213W 597 nt3.42□□□□□ -1.86
MSH1P25846 TDA8YAL064C-A 381 nt3.42□□□□□ -1.86
MSH1P25846 YAR062WYAR062W 597 nt3.42□□□□□ -1.86
MSH1P25846 XRN1YGL173C 4587 nt3.42□□□□□ -1.86
MSH1P25846 UBP14YBR058C 2346 nt3.42□□□□□ -1.86
MSH1P25846 GCN1YGL195W 8019 nt3.41□□□□□ -1.86
MSH1P25846 SPO71YDR104C 3738 nt3.41□□□□□ -1.86
MSH1P25846 YNL193WYNL193W 1677 nt3.41□□□□□ -1.86
MSH1P25846 snR84snR84 550 nt3.41□□□□□ -1.86
MSH1P25846 YJL086CYJL086C 369 nt3.41□□□□□ -1.86
MSH1P25846 NYV1YLR093C 762 nt3.41□□□□□ -1.86
MSH1P25846 YLR379WYLR379W 375 nt3.41□□□□□ -1.86
MSH1P25846 RPS16AYMR143W 432 nt3.41□□□□□ -1.86
MSH1P25846 SSN8YNL025C 972 nt3.41□□□□□ -1.86
MSH1P25846 RUF22RUF22 515 nt3.41□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms