Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.03■□□□□ 0.96
XPAP23025 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
XPAP23025 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
XPAP23025 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.03■□□□□ 0.96
XPAP23025 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 AC245052.3-201ENST00000450182 901 ntBASIC21.03■□□□□ 0.96
XPAP23025 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.03■□□□□ 0.96
XPAP23025 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
XPAP23025 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
XPAP23025 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XPAP23025 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XPAP23025 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XPAP23025 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XPAP23025 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
XPAP23025 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
XPAP23025 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.02■□□□□ 0.96
XPAP23025 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.02■□□□□ 0.96
XPAP23025 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
XPAP23025 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XPAP23025 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
XPAP23025 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XPAP23025 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XPAP23025 CROCCP5-201ENST00000436658 830 ntBASIC21.01■□□□□ 0.95
XPAP23025 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.01■□□□□ 0.95
XPAP23025 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.01■□□□□ 0.95
XPAP23025 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XPAP23025 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.01■□□□□ 0.95
XPAP23025 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XPAP23025 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XPAP23025 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
XPAP23025 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
XPAP23025 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21■□□□□ 0.95
XPAP23025 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XPAP23025 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
XPAP23025 ID1-201ENST00000376105 1233 ntBASIC21■□□□□ 0.95
XPAP23025 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XPAP23025 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21■□□□□ 0.95
XPAP23025 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21■□□□□ 0.95
XPAP23025 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
XPAP23025 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21■□□□□ 0.95
XPAP23025 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21■□□□□ 0.95
XPAP23025 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XPAP23025 FBXW4P1-201ENST00000426721 2239 ntBASIC21■□□□□ 0.95
XPAP23025 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.99■□□□□ 0.95
XPAP23025 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.99■□□□□ 0.95
XPAP23025 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 RBM17P2-201ENST00000616397 1405 ntBASIC20.99■□□□□ 0.95
XPAP23025 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.99■□□□□ 0.95
XPAP23025 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.99■□□□□ 0.95
XPAP23025 CNN2P6-201ENST00000439038 900 ntBASIC20.99■□□□□ 0.95
XPAP23025 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.99■□□□□ 0.95
XPAP23025 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
XPAP23025 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.99■□□□□ 0.95
XPAP23025 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.99■□□□□ 0.95
XPAP23025 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
XPAP23025 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XPAP23025 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.98■□□□□ 0.95
XPAP23025 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.98■□□□□ 0.95
XPAP23025 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
XPAP23025 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.98■□□□□ 0.95
XPAP23025 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XPAP23025 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.98■□□□□ 0.95
XPAP23025 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
XPAP23025 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.98■□□□□ 0.95
XPAP23025 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.98■□□□□ 0.95
XPAP23025 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.98■□□□□ 0.95
XPAP23025 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
XPAP23025 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.98■□□□□ 0.95
XPAP23025 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XPAP23025 AC008694.1-202ENST00000636953 945 ntBASIC20.98■□□□□ 0.95
XPAP23025 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XPAP23025 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XPAP23025 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XPAP23025 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XPAP23025 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.97■□□□□ 0.95
XPAP23025 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XPAP23025 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XPAP23025 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
XPAP23025 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
XPAP23025 AC007322.4-201ENST00000509611 723 ntBASIC20.97■□□□□ 0.95
XPAP23025 AC243732.1-201ENST00000612648 864 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms